R Basic

Introduction

R as a calculator

1 + 100
## [1] 101
2^2
## [1] 4
4-1
## [1] 3
2*2
## [1] 4
3+5*2
## [1] 13
(3+5)*2
## [1] 16
2e2
## [1] 200
2/10000
## [1] 2e-04
log(1)
## [1] 0
exp(0)
## [1] 1
1 == 1
## [1] TRUE
1 >= 1
## [1] TRUE
1 < 1
## [1] FALSE
x <- 10
x + x
## [1] 20
y <- x+x
y
## [1] 20

Vectorization

1:5
## [1] 1 2 3 4 5
2^(1:5)
## [1]  2  4  8 16 32
v <- 1:5
2^v
## [1]  2  4  8 16 32
log10(v)
## [1] 0.0000000 0.3010300 0.4771213 0.6020600 0.6989700

Environment

ls()
## [1] "v" "x" "y"
rm(v)
ls()
## [1] "x" "y"

Package Management

installed.packages()
##                  Package           
## abind            "abind"           
## afex             "afex"            
## AICcmodavg       "AICcmodavg"      
## alabama          "alabama"         
## askpass          "askpass"         
## assertthat       "assertthat"      
## backports        "backports"       
## base             "base"            
## base64enc        "base64enc"       
## basefun          "basefun"         
## BayesFactor      "BayesFactor"     
## bayestestR       "bayestestR"      
## BB               "BB"              
## bbmle            "bbmle"           
## bdsmatrix        "bdsmatrix"       
## BH               "BH"              
## bit              "bit"             
## bit64            "bit64"           
## bitops           "bitops"          
## blob             "blob"            
## boot             "boot"            
## bridgesampling   "bridgesampling"  
## brio             "brio"            
## Brobdingnag      "Brobdingnag"     
## broom            "broom"           
## bslib            "bslib"           
## BWStest          "BWStest"         
## cachem           "cachem"          
## callr            "callr"           
## car              "car"             
## carData          "carData"         
## cartogram        "cartogram"       
## caTools          "caTools"         
## cellranger       "cellranger"      
## changepoint      "changepoint"     
## checkmate        "checkmate"       
## class            "class"           
## classInt         "classInt"        
## cli              "cli"             
## clipr            "clipr"           
## cluster          "cluster"         
## coda             "coda"            
## codetools        "codetools"       
## coin             "coin"            
## colorspace       "colorspace"      
## commonmark       "commonmark"      
## compiler         "compiler"        
## coneproj         "coneproj"        
## contfrac         "contfrac"        
## correlation      "correlation"     
## corrplot         "corrplot"        
## covr             "covr"            
## cowplot          "cowplot"         
## coxme            "coxme"           
## cpp11            "cpp11"           
## crayon           "crayon"          
## curl             "curl"            
## cyclocomp        "cyclocomp"       
## data.table       "data.table"      
## datasets         "datasets"        
## datawizard       "datawizard"      
## DBI              "DBI"             
## dbplyr           "dbplyr"          
## deldir           "deldir"          
## DEoptimR         "DEoptimR"        
## desc             "desc"            
## deSolve          "deSolve"         
## dichromat        "dichromat"       
## diffobj          "diffobj"         
## digest           "digest"          
## doParallel       "doParallel"      
## doRNG            "doRNG"           
## dplyr            "dplyr"           
## dreamerr         "dreamerr"        
## dtplyr           "dtplyr"          
## e1071            "e1071"           
## effectsize       "effectsize"      
## ellipsis         "ellipsis"        
## elliptic         "elliptic"        
## evaluate         "evaluate"        
## extrafont        "extrafont"       
## extrafontdb      "extrafontdb"     
## fansi            "fansi"           
## farver           "farver"          
## fastGHQuad       "fastGHQuad"      
## fastICA          "fastICA"         
## fastmap          "fastmap"         
## fBasics          "fBasics"         
## feather          "feather"         
## fGarch           "fGarch"          
## fixest           "fixest"          
## forcats          "forcats"         
## foreach          "foreach"         
## forecast         "forecast"        
## foreign          "foreign"         
## Formula          "Formula"         
## fracdiff         "fracdiff"        
## fs               "fs"              
## future           "future"          
## future.apply     "future.apply"    
## gapminder        "gapminder"       
## gargle           "gargle"          
## gcookbook        "gcookbook"       
## gdtools          "gdtools"         
## generics         "generics"        
## ggcorrplot       "ggcorrplot"      
## ggfortify        "ggfortify"       
## ggplot2          "ggplot2"         
## ggplot2movies    "ggplot2movies"   
## ggpubr           "ggpubr"          
## ggrepel          "ggrepel"         
## ggridges         "ggridges"        
## ggsci            "ggsci"           
## ggside           "ggside"          
## ggsignif         "ggsignif"        
## ggstatsplot      "ggstatsplot"     
## glmnet           "glmnet"          
## globals          "globals"         
## glue             "glue"            
## gmp              "gmp"             
## googledrive      "googledrive"     
## googlesheets4    "googlesheets4"   
## gower            "gower"           
## gplots           "gplots"          
## graphics         "graphics"        
## grDevices        "grDevices"       
## grid             "grid"            
## gridExtra        "gridExtra"       
## gss              "gss"             
## gtable           "gtable"          
## gtools           "gtools"          
## hardhat          "hardhat"         
## haven            "haven"           
## hexbin           "hexbin"          
## highr            "highr"           
## hms              "hms"             
## hrbrthemes       "hrbrthemes"      
## htmltools        "htmltools"       
## httr             "httr"            
## hunspell         "hunspell"        
## hypergeo         "hypergeo"        
## ids              "ids"             
## inline           "inline"          
## insight          "insight"         
## interp           "interp"          
## ipred            "ipred"           
## isoband          "isoband"         
## ISwR             "ISwR"            
## iterators        "iterators"       
## jpeg             "jpeg"            
## jquerylib        "jquerylib"       
## jsonlite         "jsonlite"        
## KernSmooth       "KernSmooth"      
## KFAS             "KFAS"            
## knitr            "knitr"           
## kSamples         "kSamples"        
## labeling         "labeling"        
## LaplacesDemon    "LaplacesDemon"   
## lattice          "lattice"         
## latticeExtra     "latticeExtra"    
## lava             "lava"            
## lazyeval         "lazyeval"        
## lfda             "lfda"            
## libcoin          "libcoin"         
## lifecycle        "lifecycle"       
## lintr            "lintr"           
## listenv          "listenv"         
## lme4             "lme4"            
## lmerTest         "lmerTest"        
## lmtest           "lmtest"          
## logspline        "logspline"       
## loo              "loo"             
## lubridate        "lubridate"       
## magrittr         "magrittr"        
## mapdata          "mapdata"         
## mapproj          "mapproj"         
## maps             "maps"            
## maptools         "maptools"        
## markdown         "markdown"        
## MASS             "MASS"            
## mathjaxr         "mathjaxr"        
## Matrix           "Matrix"          
## MatrixModels     "MatrixModels"    
## matrixStats      "matrixStats"     
## mc2d             "mc2d"            
## memoise          "memoise"         
## metaBMA          "metaBMA"         
## metadat          "metadat"         
## metafor          "metafor"         
## metaplus         "metaplus"        
## methods          "methods"         
## mgcv             "mgcv"            
## mime             "mime"            
## minqa            "minqa"           
## mlt              "mlt"             
## mnormt           "mnormt"          
## modelr           "modelr"          
## modeltools       "modeltools"      
## mratios          "mratios"         
## MSwM             "MSwM"            
## multcomp         "multcomp"        
## multcompView     "multcompView"    
## munsell          "munsell"         
## mvtnorm          "mvtnorm"         
## nlme             "nlme"            
## nloptr           "nloptr"          
## nnet             "nnet"            
## numDeriv         "numDeriv"        
## openssl          "openssl"         
## orthopolynom     "orthopolynom"    
## packcircles      "packcircles"     
## packrat          "packrat"         
## paletteer        "paletteer"       
## palmerpenguins   "palmerpenguins"  
## parallel         "parallel"        
## parallelly       "parallelly"      
## parameters       "parameters"      
## patchwork        "patchwork"       
## pbapply          "pbapply"         
## pbkrtest         "pbkrtest"        
## performance      "performance"     
## permute          "permute"         
## pillar           "pillar"          
## pkgbuild         "pkgbuild"        
## pkgconfig        "pkgconfig"       
## pkgload          "pkgload"         
## plyr             "plyr"            
## PMCMRplus        "PMCMRplus"       
## png              "png"             
## polynom          "polynom"         
## praise           "praise"          
## prettyunits      "prettyunits"     
## prismatic        "prismatic"       
## processx         "processx"        
## prodlim          "prodlim"         
## progress         "progress"        
## progressr        "progressr"       
## proxy            "proxy"           
## ps               "ps"              
## psych            "psych"           
## purrr            "purrr"           
## quadprog         "quadprog"        
## quantmod         "quantmod"        
## quantreg         "quantreg"        
## R6               "R6"              
## rappdirs         "rappdirs"        
## rARPACK          "rARPACK"         
## raster           "raster"          
## rasterVis        "rasterVis"       
## RColorBrewer     "RColorBrewer"    
## Rcpp             "Rcpp"            
## RcppArmadillo    "RcppArmadillo"   
## RcppEigen        "RcppEigen"       
## RcppGSL          "RcppGSL"         
## RcppParallel     "RcppParallel"    
## RcppZiggurat     "RcppZiggurat"    
## readr            "readr"           
## readxl           "readxl"          
## recipes          "recipes"         
## rematch          "rematch"         
## rematch2         "rematch2"        
## remotes          "remotes"         
## reprex           "reprex"          
## reshape          "reshape"         
## reshape2         "reshape2"        
## rex              "rex"             
## Rfast            "Rfast"           
## rgdal            "rgdal"           
## rlang            "rlang"           
## rmarkdown        "rmarkdown"       
## Rmpfr            "Rmpfr"           
## rngtools         "rngtools"        
## robustbase       "robustbase"      
## ROCR             "ROCR"            
## rpart            "rpart"           
## rprojroot        "rprojroot"       
## rsconnect        "rsconnect"       
## RSpectra         "RSpectra"        
## rstan            "rstan"           
## rstantools       "rstantools"      
## rstatix          "rstatix"         
## rstudioapi       "rstudioapi"      
## Rttf2pt1         "Rttf2pt1"        
## rvest            "rvest"           
## s2               "s2"              
## sandwich         "sandwich"        
## sass             "sass"            
## scales           "scales"          
## selectr          "selectr"         
## sf               "sf"              
## shape            "shape"           
## SimComp          "SimComp"         
## sm               "sm"              
## sp               "sp"              
## SparseM          "SparseM"         
## spatial          "spatial"         
## spelling         "spelling"        
## splines          "splines"         
## SQUAREM          "SQUAREM"         
## stabledist       "stabledist"      
## StanHeaders      "StanHeaders"     
## stats            "stats"           
## stats4           "stats4"          
## statsExpressions "statsExpressions"
## stringi          "stringi"         
## stringr          "stringr"         
## strucchange      "strucchange"     
## SuppDists        "SuppDists"       
## survival         "survival"        
## survPresmooth    "survPresmooth"   
## svglite          "svglite"         
## sys              "sys"             
## systemfonts      "systemfonts"     
## tcltk            "tcltk"           
## terra            "terra"           
## testthat         "testthat"        
## TH.data          "TH.data"         
## tibble           "tibble"          
## tidyr            "tidyr"           
## tidyselect       "tidyselect"      
## tidyverse        "tidyverse"       
## timeDate         "timeDate"        
## timeSeries       "timeSeries"      
## tinytex          "tinytex"         
## TMB              "TMB"             
## tools            "tools"           
## tram             "tram"            
## tseries          "tseries"         
## TTR              "TTR"             
## tzdb             "tzdb"            
## units            "units"           
## unmarked         "unmarked"        
## urca             "urca"            
## utf8             "utf8"            
## utils            "utils"           
## uuid             "uuid"            
## variables        "variables"       
## vars             "vars"            
## vctrs            "vctrs"           
## vdiffr           "vdiffr"          
## vegan            "vegan"           
## VGAM             "VGAM"            
## vioplot          "vioplot"         
## viridis          "viridis"         
## viridisLite      "viridisLite"     
## vroom            "vroom"           
## waldo            "waldo"           
## withr            "withr"           
## wk               "wk"              
## WRS2             "WRS2"            
## xfun             "xfun"            
## xml2             "xml2"            
## xmlparsedata     "xmlparsedata"    
## xtable           "xtable"          
## xts              "xts"             
## yaml             "yaml"            
## zeallot          "zeallot"         
## zoo              "zoo"             
##                  LibPath                                                         
## abind            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## afex             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## AICcmodavg       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## alabama          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## askpass          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## assertthat       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## backports        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## base             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## base64enc        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## basefun          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## BayesFactor      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bayestestR       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## BB               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bbmle            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bdsmatrix        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## BH               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bit              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bit64            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bitops           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## blob             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## boot             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bridgesampling   "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## brio             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Brobdingnag      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## broom            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## bslib            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## BWStest          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cachem           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## callr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## car              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## carData          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cartogram        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## caTools          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cellranger       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## changepoint      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## checkmate        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## class            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## classInt         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cli              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## clipr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cluster          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## coda             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## codetools        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## coin             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## colorspace       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## commonmark       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## compiler         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## coneproj         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## contfrac         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## correlation      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## corrplot         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## covr             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cowplot          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## coxme            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cpp11            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## crayon           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## curl             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## cyclocomp        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## data.table       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## datasets         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## datawizard       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## DBI              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## dbplyr           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## deldir           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## DEoptimR         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## desc             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## deSolve          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## dichromat        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## diffobj          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## digest           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## doParallel       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## doRNG            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## dplyr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## dreamerr         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## dtplyr           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## e1071            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## effectsize       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ellipsis         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## elliptic         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## evaluate         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## extrafont        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## extrafontdb      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fansi            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## farver           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fastGHQuad       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fastICA          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fastmap          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fBasics          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## feather          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fGarch           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fixest           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## forcats          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## foreach          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## forecast         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## foreign          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Formula          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fracdiff         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## fs               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## future           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## future.apply     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gapminder        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gargle           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gcookbook        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gdtools          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## generics         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggcorrplot       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggfortify        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggplot2          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggplot2movies    "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggpubr           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggrepel          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggridges         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggsci            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggside           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggsignif         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ggstatsplot      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## glmnet           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## globals          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## glue             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gmp              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## googledrive      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## googlesheets4    "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gower            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gplots           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## graphics         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## grDevices        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## grid             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gridExtra        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gss              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gtable           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## gtools           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## hardhat          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## haven            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## hexbin           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## highr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## hms              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## hrbrthemes       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## htmltools        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## httr             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## hunspell         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## hypergeo         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ids              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## inline           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## insight          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## interp           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ipred            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## isoband          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ISwR             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## iterators        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## jpeg             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## jquerylib        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## jsonlite         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## KernSmooth       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## KFAS             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## knitr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## kSamples         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## labeling         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## LaplacesDemon    "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lattice          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## latticeExtra     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lava             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lazyeval         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lfda             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## libcoin          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lifecycle        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lintr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## listenv          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lme4             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lmerTest         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lmtest           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## logspline        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## loo              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## lubridate        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## magrittr         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mapdata          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mapproj          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## maps             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## maptools         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## markdown         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## MASS             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mathjaxr         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Matrix           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## MatrixModels     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## matrixStats      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mc2d             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## memoise          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## metaBMA          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## metadat          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## metafor          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## metaplus         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## methods          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mgcv             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mime             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## minqa            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mlt              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mnormt           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## modelr           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## modeltools       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mratios          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## MSwM             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## multcomp         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## multcompView     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## munsell          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## mvtnorm          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## nlme             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## nloptr           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## nnet             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## numDeriv         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## openssl          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## orthopolynom     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## packcircles      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## packrat          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## paletteer        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## palmerpenguins   "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## parallel         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## parallelly       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## parameters       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## patchwork        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## pbapply          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## pbkrtest         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## performance      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## permute          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## pillar           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## pkgbuild         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## pkgconfig        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## pkgload          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## plyr             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## PMCMRplus        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## png              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## polynom          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## praise           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## prettyunits      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## prismatic        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## processx         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## prodlim          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## progress         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## progressr        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## proxy            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ps               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## psych            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## purrr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## quadprog         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## quantmod         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## quantreg         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## R6               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rappdirs         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rARPACK          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## raster           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rasterVis        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RColorBrewer     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Rcpp             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RcppArmadillo    "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RcppEigen        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RcppGSL          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RcppParallel     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RcppZiggurat     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## readr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## readxl           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## recipes          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rematch          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rematch2         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## remotes          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## reprex           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## reshape          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## reshape2         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rex              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Rfast            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rgdal            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rlang            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rmarkdown        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Rmpfr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rngtools         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## robustbase       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## ROCR             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rpart            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rprojroot        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rsconnect        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## RSpectra         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rstan            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rstantools       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rstatix          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rstudioapi       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## Rttf2pt1         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## rvest            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## s2               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## sandwich         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## sass             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## scales           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## selectr          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## sf               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## shape            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## SimComp          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## sm               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## sp               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## SparseM          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## spatial          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## spelling         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## splines          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## SQUAREM          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## stabledist       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## StanHeaders      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## stats            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## stats4           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## statsExpressions "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## stringi          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## stringr          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## strucchange      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## SuppDists        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## survival         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## survPresmooth    "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## svglite          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## sys              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## systemfonts      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tcltk            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## terra            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## testthat         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## TH.data          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tibble           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tidyr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tidyselect       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tidyverse        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## timeDate         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## timeSeries       "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tinytex          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## TMB              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tools            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tram             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tseries          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## TTR              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## tzdb             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## units            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## unmarked         "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## urca             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## utf8             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## utils            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## uuid             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## variables        "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## vars             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## vctrs            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## vdiffr           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## vegan            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## VGAM             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## vioplot          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## viridis          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## viridisLite      "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## vroom            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## waldo            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## withr            "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## wk               "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## WRS2             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## xfun             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## xml2             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## xmlparsedata     "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## xtable           "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## xts              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## yaml             "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## zeallot          "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
## zoo              "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
##                  Version      Priority     
## abind            "1.4-5"      NA           
## afex             "1.2-0"      NA           
## AICcmodavg       "2.3-1"      NA           
## alabama          "2022.4-1"   NA           
## askpass          "1.1"        NA           
## assertthat       "0.2.1"      NA           
## backports        "1.4.1"      NA           
## base             "4.2.1"      "base"       
## base64enc        "0.1-3"      NA           
## basefun          "1.1-3"      NA           
## BayesFactor      "0.9.12-4.4" NA           
## bayestestR       "0.13.0"     NA           
## BB               "2019.10-1"  NA           
## bbmle            "1.0.25"     NA           
## bdsmatrix        "1.3-6"      NA           
## BH               "1.78.0-0"   NA           
## bit              "4.0.4"      NA           
## bit64            "4.0.5"      NA           
## bitops           "1.0-7"      NA           
## blob             "1.2.3"      NA           
## boot             "1.3-28"     "recommended"
## bridgesampling   "1.1-2"      NA           
## brio             "1.1.3"      NA           
## Brobdingnag      "1.2-9"      NA           
## broom            "1.0.1"      NA           
## bslib            "0.4.0"      NA           
## BWStest          "0.2.2"      NA           
## cachem           "1.0.6"      NA           
## callr            "3.7.2"      NA           
## car              "3.1-1"      NA           
## carData          "3.0-5"      NA           
## cartogram        "0.2.2"      NA           
## caTools          "1.18.2"     NA           
## cellranger       "1.1.0"      NA           
## changepoint      "2.2.3"      NA           
## checkmate        "2.1.0"      NA           
## class            "7.3-20"     "recommended"
## classInt         "0.4-8"      NA           
## cli              "3.4.1"      NA           
## clipr            "0.8.0"      NA           
## cluster          "2.1.3"      "recommended"
## coda             "0.19-4"     NA           
## codetools        "0.2-18"     "recommended"
## coin             "1.4-2"      NA           
## colorspace       "2.0-3"      NA           
## commonmark       "1.8.1"      NA           
## compiler         "4.2.1"      "base"       
## coneproj         "1.16"       NA           
## contfrac         "1.1-12"     NA           
## correlation      "0.8.3"      NA           
## corrplot         "0.92"       NA           
## covr             "3.6.1"      NA           
## cowplot          "1.1.1"      NA           
## coxme            "2.2-18.1"   "optional"   
## cpp11            "0.4.3"      NA           
## crayon           "1.5.2"      NA           
## curl             "4.3.3"      NA           
## cyclocomp        "1.1.0"      NA           
## data.table       "1.14.4"     NA           
## datasets         "4.2.1"      "base"       
## datawizard       "0.6.3"      NA           
## DBI              "1.1.3"      NA           
## dbplyr           "2.2.1"      NA           
## deldir           "1.0-6"      NA           
## DEoptimR         "1.0-11"     NA           
## desc             "1.4.2"      NA           
## deSolve          "1.34"       NA           
## dichromat        "2.0-0.1"    NA           
## diffobj          "0.3.5"      NA           
## digest           "0.6.29"     NA           
## doParallel       "1.0.17"     NA           
## doRNG            "1.8.2"      NA           
## dplyr            "1.0.10"     NA           
## dreamerr         "1.2.3"      NA           
## dtplyr           "1.2.2"      NA           
## e1071            "1.7-12"     NA           
## effectsize       "0.8.2"      NA           
## ellipsis         "0.3.2"      NA           
## elliptic         "1.4-0"      NA           
## evaluate         "0.16"       NA           
## extrafont        "0.18"       NA           
## extrafontdb      "1.0"        NA           
## fansi            "1.0.3"      NA           
## farver           "2.1.1"      NA           
## fastGHQuad       "1.0.1"      NA           
## fastICA          "1.2-3"      NA           
## fastmap          "1.1.0"      NA           
## fBasics          "4021.93"    NA           
## feather          "0.3.5"      NA           
## fGarch           "4021.88"    NA           
## fixest           "0.11.0"     NA           
## forcats          "0.5.2"      NA           
## foreach          "1.5.2"      NA           
## forecast         "8.18"       NA           
## foreign          "0.8-82"     "recommended"
## Formula          "1.2-4"      NA           
## fracdiff         "1.5-2"      NA           
## fs               "1.5.2"      NA           
## future           "1.28.0"     NA           
## future.apply     "1.9.1"      NA           
## gapminder        "0.3.0"      NA           
## gargle           "1.2.1"      NA           
## gcookbook        "2.0"        NA           
## gdtools          "0.2.4"      NA           
## generics         "0.1.3"      NA           
## ggcorrplot       "0.1.4"      NA           
## ggfortify        "0.4.14"     NA           
## ggplot2          "3.4.0"      NA           
## ggplot2movies    "0.0.1"      NA           
## ggpubr           "0.5.0"      NA           
## ggrepel          "0.9.1"      NA           
## ggridges         "0.5.4"      NA           
## ggsci            "2.9"        NA           
## ggside           "0.2.1"      NA           
## ggsignif         "0.6.4"      NA           
## ggstatsplot      "0.9.5"      NA           
## glmnet           "4.1-4"      NA           
## globals          "0.16.1"     NA           
## glue             "1.6.2"      NA           
## gmp              "0.6-7"      NA           
## googledrive      "2.0.0"      NA           
## googlesheets4    "1.0.1"      NA           
## gower            "1.0.0"      NA           
## gplots           "3.1.3"      NA           
## graphics         "4.2.1"      "base"       
## grDevices        "4.2.1"      "base"       
## grid             "4.2.1"      "base"       
## gridExtra        "2.3"        NA           
## gss              "2.2-3"      NA           
## gtable           "0.3.1"      NA           
## gtools           "3.9.3"      NA           
## hardhat          "1.2.0"      NA           
## haven            "2.5.1"      NA           
## hexbin           "1.28.2"     NA           
## highr            "0.9"        NA           
## hms              "1.1.2"      NA           
## hrbrthemes       "0.8.0"      NA           
## htmltools        "0.5.3"      NA           
## httr             "1.4.4"      NA           
## hunspell         "3.0.2"      NA           
## hypergeo         "1.2-13"     NA           
## ids              "1.0.1"      NA           
## inline           "0.3.19"     NA           
## insight          "0.18.6"     NA           
## interp           "1.1-3"      NA           
## ipred            "0.9-13"     NA           
## isoband          "0.2.6"      NA           
## ISwR             "2.0-8"      NA           
## iterators        "1.0.14"     NA           
## jpeg             "0.1-9"      NA           
## jquerylib        "0.1.4"      NA           
## jsonlite         "1.8.0"      NA           
## KernSmooth       "2.23-20"    "recommended"
## KFAS             "1.4.6"      NA           
## knitr            "1.40"       NA           
## kSamples         "1.2-9"      NA           
## labeling         "0.4.2"      NA           
## LaplacesDemon    "16.1.6"     NA           
## lattice          "0.20-45"    "recommended"
## latticeExtra     "0.6-30"     NA           
## lava             "1.7.0"      NA           
## lazyeval         "0.2.2"      NA           
## lfda             "1.1.3"      NA           
## libcoin          "1.0-9"      NA           
## lifecycle        "1.0.3"      NA           
## lintr            "3.0.2"      NA           
## listenv          "0.8.0"      NA           
## lme4             "1.1-31"     NA           
## lmerTest         "3.1-3"      NA           
## lmtest           "0.9-40"     NA           
## logspline        "2.1.17"     NA           
## loo              "2.5.1"      NA           
## lubridate        "1.8.0"      NA           
## magrittr         "2.0.3"      NA           
## mapdata          "2.3.1"      NA           
## mapproj          "1.2.8"      NA           
## maps             "3.4.0"      NA           
## maptools         "1.1-5"      NA           
## markdown         "1.1"        NA           
## MASS             "7.3-57"     "recommended"
## mathjaxr         "1.6-0"      NA           
## Matrix           "1.5-1"      "recommended"
## MatrixModels     "0.5-1"      NA           
## matrixStats      "0.62.0"     NA           
## mc2d             "0.1-21"     NA           
## memoise          "2.0.1"      NA           
## metaBMA          "0.6.7"      NA           
## metadat          "1.2-0"      NA           
## metafor          "3.8-1"      NA           
## metaplus         "1.0-4"      NA           
## methods          "4.2.1"      "base"       
## mgcv             "1.8-40"     "recommended"
## mime             "0.12"       NA           
## minqa            "1.2.5"      NA           
## mlt              "1.4-3"      NA           
## mnormt           "2.1.1"      NA           
## modelr           "0.1.9"      NA           
## modeltools       "0.2-23"     NA           
## mratios          "1.4.2"      NA           
## MSwM             "1.5"        NA           
## multcomp         "1.4-20"     NA           
## multcompView     "0.1-8"      NA           
## munsell          "0.5.0"      NA           
## mvtnorm          "1.1-3"      NA           
## nlme             "3.1-157"    "recommended"
## nloptr           "2.0.3"      NA           
## nnet             "7.3-17"     "recommended"
## numDeriv         "2016.8-1.1" NA           
## openssl          "2.0.4"      NA           
## orthopolynom     "1.0-6.1"    NA           
## packcircles      "0.3.4"      NA           
## packrat          "0.8.1"      NA           
## paletteer        "1.5.0"      NA           
## palmerpenguins   "0.1.1"      NA           
## parallel         "4.2.1"      "base"       
## parallelly       "1.32.1"     NA           
## parameters       "0.19.0"     NA           
## patchwork        "1.1.2"      NA           
## pbapply          "1.5-0"      NA           
## pbkrtest         "0.5.1"      NA           
## performance      "0.10.0"     NA           
## permute          "0.9-7"      NA           
## pillar           "1.8.1"      NA           
## pkgbuild         "1.3.1"      NA           
## pkgconfig        "2.0.3"      NA           
## pkgload          "1.3.0"      NA           
## plyr             "1.8.7"      NA           
## PMCMRplus        "1.9.6"      NA           
## png              "0.1-7"      NA           
## polynom          "1.4-1"      NA           
## praise           "1.0.0"      NA           
## prettyunits      "1.1.1"      NA           
## prismatic        "1.1.1"      NA           
## processx         "3.7.0"      NA           
## prodlim          "2019.11.13" NA           
## progress         "1.2.2"      NA           
## progressr        "0.11.0"     NA           
## proxy            "0.4-27"     NA           
## ps               "1.7.1"      NA           
## psych            "2.2.9"      NA           
## purrr            "0.3.5"      NA           
## quadprog         "1.5-8"      NA           
## quantmod         "0.4.20"     NA           
## quantreg         "5.94"       NA           
## R6               "2.5.1"      NA           
## rappdirs         "0.3.3"      NA           
## rARPACK          "0.11-0"     NA           
## raster           "3.6-3"      NA           
## rasterVis        "0.51.2"     NA           
## RColorBrewer     "1.1-3"      NA           
## Rcpp             "1.0.9"      NA           
## RcppArmadillo    "0.11.4.0.1" NA           
## RcppEigen        "0.3.3.9.2"  NA           
## RcppGSL          "0.3.12"     NA           
## RcppParallel     "5.1.5"      NA           
## RcppZiggurat     "0.1.6"      NA           
## readr            "2.1.3"      NA           
## readxl           "1.4.1"      NA           
## recipes          "1.0.2"      NA           
## rematch          "1.0.1"      NA           
## rematch2         "2.1.2"      NA           
## remotes          "2.4.2"      NA           
## reprex           "2.0.2"      NA           
## reshape          "0.8.9"      NA           
## reshape2         "1.4.4"      NA           
## rex              "1.2.1"      NA           
## Rfast            "2.0.6"      NA           
## rgdal            "1.5-32"     NA           
## rlang            "1.0.6"      NA           
## rmarkdown        "2.16"       NA           
## Rmpfr            "0.8-9"      NA           
## rngtools         "1.5.2"      NA           
## robustbase       "0.95-0"     NA           
## ROCR             "1.0-11"     NA           
## rpart            "4.1.16"     "recommended"
## rprojroot        "2.0.3"      NA           
## rsconnect        "0.8.28"     NA           
## RSpectra         "0.16-1"     NA           
## rstan            "2.21.7"     NA           
## rstantools       "2.2.0"      NA           
## rstatix          "0.7.1"      NA           
## rstudioapi       "0.14"       NA           
## Rttf2pt1         "1.3.11"     NA           
## rvest            "1.0.3"      NA           
## s2               "1.1.0"      NA           
## sandwich         "3.0-2"      NA           
## sass             "0.4.2"      NA           
## scales           "1.2.1"      NA           
## selectr          "0.4-2"      NA           
## sf               "1.0-8"      NA           
## shape            "1.4.6"      NA           
## SimComp          "3.3"        NA           
## sm               "2.2-5.7.1"  NA           
## sp               "1.5-0"      NA           
## SparseM          "1.81"       NA           
## spatial          "7.3-15"     "recommended"
## spelling         "2.2"        NA           
## splines          "4.2.1"      "base"       
## SQUAREM          "2021.1"     NA           
## stabledist       "0.7-1"      NA           
## StanHeaders      "2.21.0-7"   NA           
## stats            "4.2.1"      "base"       
## stats4           "4.2.1"      "base"       
## statsExpressions "1.3.4"      NA           
## stringi          "1.7.8"      NA           
## stringr          "1.4.1"      NA           
## strucchange      "1.5-3"      NA           
## SuppDists        "1.1-9.7"    NA           
## survival         "3.3-1"      "recommended"
## survPresmooth    "1.1-11"     NA           
## svglite          "2.1.0"      NA           
## sys              "3.4.1"      NA           
## systemfonts      "1.0.4"      NA           
## tcltk            "4.2.1"      "base"       
## terra            "1.6-17"     NA           
## testthat         "3.1.5"      NA           
## TH.data          "1.1-1"      NA           
## tibble           "3.1.8"      NA           
## tidyr            "1.2.1"      NA           
## tidyselect       "1.2.0"      NA           
## tidyverse        "1.3.2"      NA           
## timeDate         "4021.106"   NA           
## timeSeries       "4021.105"   NA           
## tinytex          "0.42"       NA           
## TMB              "1.9.1"      NA           
## tools            "4.2.1"      "base"       
## tram             "0.8-0"      NA           
## tseries          "0.10-52"    NA           
## TTR              "0.24.3"     NA           
## tzdb             "0.3.0"      NA           
## units            "0.8-0"      NA           
## unmarked         "1.2.5"      NA           
## urca             "1.3-3"      NA           
## utf8             "1.2.2"      NA           
## utils            "4.2.1"      "base"       
## uuid             "1.1-0"      NA           
## variables        "1.1-1"      NA           
## vars             "1.5-6"      NA           
## vctrs            "0.5.1"      NA           
## vdiffr           "1.0.4"      NA           
## vegan            "2.6-2"      NA           
## VGAM             "1.1-7"      NA           
## vioplot          "0.3.7"      NA           
## viridis          "0.6.2"      NA           
## viridisLite      "0.4.1"      NA           
## vroom            "1.6.0"      NA           
## waldo            "0.4.0"      NA           
## withr            "2.5.0"      NA           
## wk               "0.7.0"      NA           
## WRS2             "1.1-4"      NA           
## xfun             "0.33"       NA           
## xml2             "1.3.3"      NA           
## xmlparsedata     "1.0.5"      NA           
## xtable           "1.8-4"      NA           
## xts              "0.12.2"     NA           
## yaml             "2.3.5"      NA           
## zeallot          "0.1.0"      NA           
## zoo              "1.8-11"     NA           
##                  Depends                                                                                     
## abind            "R (>= 1.5.0)"                                                                              
## afex             "R (>= 3.5.0), lme4 (>= 1.1-8)"                                                             
## AICcmodavg       "R (>= 3.2.0)"                                                                              
## alabama          "R (>= 2.10.1), numDeriv"                                                                   
## askpass          NA                                                                                          
## assertthat       NA                                                                                          
## backports        "R (>= 3.0.0)"                                                                              
## base             NA                                                                                          
## base64enc        "R (>= 2.9.0)"                                                                              
## basefun          "variables (>= 1.1-0), R (>= 3.2.0)"                                                        
## BayesFactor      "R (>= 3.2.0), coda, Matrix (>= 1.1-1)"                                                     
## bayestestR       "R (>= 3.6)"                                                                                
## BB               "R (>= 2.6.1)"                                                                              
## bbmle            "R (>= 3.0.0), stats4"                                                                      
## bdsmatrix        "methods, R (>= 2.0.0)"                                                                     
## BH               NA                                                                                          
## bit              "R (>= 2.9.2)"                                                                              
## bit64            "R (>= 3.0.1), bit (>= 4.0.0), utils, methods, stats"                                       
## bitops           NA                                                                                          
## blob             NA                                                                                          
## boot             "R (>= 3.0.0), graphics, stats"                                                             
## bridgesampling   "R (>= 3.0.0)"                                                                              
## brio             NA                                                                                          
## Brobdingnag      "R (>= 2.13.0), methods, Matrix (>= 1.5-0)"                                                 
## broom            "R (>= 3.1)"                                                                                
## bslib            "R (>= 2.10)"                                                                               
## BWStest          NA                                                                                          
## cachem           NA                                                                                          
## callr            "R (>= 3.4)"                                                                                
## car              "R (>= 3.5.0), carData (>= 3.0-0)"                                                          
## carData          "R (>= 3.5.0)"                                                                              
## cartogram        NA                                                                                          
## caTools          "R (>= 3.6.0)"                                                                              
## cellranger       "R (>= 3.0.0)"                                                                              
## changepoint      "R(>= 3.1), methods, stats, zoo(>= 0.9-1)"                                                  
## checkmate        "R (>= 3.0.0)"                                                                              
## class            "R (>= 3.0.0), stats, utils"                                                                
## classInt         "R (>= 2.2)"                                                                                
## cli              "R (>= 3.4)"                                                                                
## clipr            NA                                                                                          
## cluster          "R (>= 3.5.0)"                                                                              
## coda             "R (>= 2.14.0)"                                                                             
## codetools        "R (>= 2.1)"                                                                                
## coin             "R (>= 3.6.0), survival"                                                                    
## colorspace       "R (>= 3.0.0), methods"                                                                     
## commonmark       NA                                                                                          
## compiler         NA                                                                                          
## coneproj         "R(>= 3.0.2)"                                                                               
## contfrac         NA                                                                                          
## correlation      "R (>= 3.6)"                                                                                
## corrplot         NA                                                                                          
## covr             "R (>= 3.1.0), methods"                                                                     
## cowplot          "R (>= 3.5.0)"                                                                              
## coxme            "survival (>= 2.36.14), methods, bdsmatrix(>= 1.3), R(>= 2.10)"                             
## cpp11            NA                                                                                          
## crayon           NA                                                                                          
## curl             "R (>= 3.0.0)"                                                                              
## cyclocomp        NA                                                                                          
## data.table       "R (>= 3.1.0)"                                                                              
## datasets         NA                                                                                          
## datawizard       "R (>= 3.6)"                                                                                
## DBI              "methods, R (>= 3.0.0)"                                                                     
## dbplyr           "R (>= 3.1)"                                                                                
## deldir           "R (>= 3.5.0)"                                                                              
## DEoptimR         NA                                                                                          
## desc             "R (>= 3.4)"                                                                                
## deSolve          "R (>= 3.3.0)"                                                                              
## dichromat        "R (>= 2.10), stats"                                                                        
## diffobj          "R (>= 3.1.0)"                                                                              
## digest           "R (>= 3.3.0)"                                                                              
## doParallel       "R (>= 2.14.0), foreach (>= 1.2.0), iterators (>= 1.0.0),\nparallel, utils"                 
## doRNG            "R (>= 3.0.0), foreach, rngtools (>= 1.5)"                                                  
## dplyr            "R (>= 3.4.0)"                                                                              
## dreamerr         NA                                                                                          
## dtplyr           "R (>= 3.3)"                                                                                
## e1071            NA                                                                                          
## effectsize       "R (>= 3.6)"                                                                                
## ellipsis         "R (>= 3.2)"                                                                                
## elliptic         "R (>= 2.5.0)"                                                                              
## evaluate         "R (>= 3.0.2)"                                                                              
## extrafont        "R (>= 2.15)"                                                                               
## extrafontdb      "R (>= 2.14)"                                                                               
## fansi            "R (>= 3.1.0)"                                                                              
## farver           NA                                                                                          
## fastGHQuad       "Rcpp (>= 0.11.0)"                                                                          
## fastICA          "R (>= 4.0.0)"                                                                              
## fastmap          NA                                                                                          
## fBasics          "R (>= 2.15.1)"                                                                             
## feather          NA                                                                                          
## fGarch           NA                                                                                          
## fixest           "R(>= 3.5.0)"                                                                               
## forcats          "R (>= 3.4)"                                                                                
## foreach          "R (>= 2.5.0)"                                                                              
## forecast         "R (>= 3.5.0),"                                                                             
## foreign          "R (>= 4.0.0)"                                                                              
## Formula          "R (>= 2.0.0), stats"                                                                       
## fracdiff         NA                                                                                          
## fs               "R (>= 3.1)"                                                                                
## future           NA                                                                                          
## future.apply     "R (>= 3.2.0), future (>= 1.27.0)"                                                          
## gapminder        "R (>= 3.1.0)"                                                                              
## gargle           "R (>= 3.5)"                                                                                
## gcookbook        "R (>= 2.10)"                                                                               
## gdtools          NA                                                                                          
## generics         "R (>= 3.2)"                                                                                
## ggcorrplot       "R (>= 3.3), ggplot2 (>= 3.3.6)"                                                            
## ggfortify        "methods, ggplot2 (>= 2.0.0)"                                                               
## ggplot2          "R (>= 3.3)"                                                                                
## ggplot2movies    "R (>= 2.10.0)"                                                                             
## ggpubr           "R (>= 3.1.0), ggplot2 (>= 3.4.0)"                                                          
## ggrepel          "R (>= 3.0.0), ggplot2 (>= 2.2.0)"                                                          
## ggridges         "R (>= 3.2)"                                                                                
## ggsci            "R (>= 3.0.2)"                                                                              
## ggside           "ggplot2 (>= 3.0.0)"                                                                        
## ggsignif         NA                                                                                          
## ggstatsplot      "R (>= 4.0.0)"                                                                              
## glmnet           "R (>= 3.6.0), Matrix (>= 1.0-6)"                                                           
## globals          "R (>= 3.1.2)"                                                                              
## glue             "R (>= 3.4)"                                                                                
## gmp              "R (>= 3.5.0)"                                                                              
## googledrive      "R (>= 3.3)"                                                                                
## googlesheets4    "R (>= 3.4)"                                                                                
## gower            NA                                                                                          
## gplots           "R (>= 3.0)"                                                                                
## graphics         NA                                                                                          
## grDevices        NA                                                                                          
## grid             NA                                                                                          
## gridExtra        NA                                                                                          
## gss              "R (>= 3.0.0), stats"                                                                       
## gtable           "R (>= 3.0)"                                                                                
## gtools           "methods, stats, utils"                                                                     
## hardhat          "R (>= 3.4.0)"                                                                              
## haven            "R (>= 3.4)"                                                                                
## hexbin           "R (>= 2.0.1), methods"                                                                     
## highr            "R (>= 3.2.3)"                                                                              
## hms              NA                                                                                          
## hrbrthemes       "R (>= 3.4.0)"                                                                              
## htmltools        "R (>= 2.14.1)"                                                                             
## httr             "R (>= 3.2)"                                                                                
## hunspell         "R (>= 3.0.2)"                                                                              
## hypergeo         "R (>= 3.1.0),"                                                                             
## ids              NA                                                                                          
## inline           NA                                                                                          
## insight          "R (>= 3.5)"                                                                                
## interp           "R (>= 3.5.0)"                                                                              
## ipred            "R (>= 2.10)"                                                                               
## isoband          NA                                                                                          
## ISwR             "R (>= 2.6.0)"                                                                              
## iterators        "R (>= 2.5.0), utils"                                                                       
## jpeg             "R (>= 2.9.0)"                                                                              
## jquerylib        NA                                                                                          
## jsonlite         "methods"                                                                                   
## KernSmooth       "R (>= 2.5.0), stats"                                                                       
## KFAS             "R (>= 3.1.0)"                                                                              
## knitr            "R (>= 3.3.0)"                                                                              
## kSamples         "SuppDists"                                                                                 
## labeling         NA                                                                                          
## LaplacesDemon    "R (>= 3.0.0)"                                                                              
## lattice          "R (>= 3.0.0)"                                                                              
## latticeExtra     "R (>= 3.6.0), lattice"                                                                     
## lava             "R (>= 3.0)"                                                                                
## lazyeval         "R (>= 3.1.0)"                                                                              
## lfda             "R (>= 3.1.0)"                                                                              
## libcoin          "R (>= 3.4.0)"                                                                              
## lifecycle        "R (>= 3.4)"                                                                                
## lintr            "R (>= 3.2)"                                                                                
## listenv          "R (>= 3.1.2)"                                                                              
## lme4             "R (>= 3.5.0), Matrix (>= 1.2-1), methods, stats"                                           
## lmerTest         "R (>= 3.2.5), lme4 (>= 1.1-10), stats, methods"                                            
## lmtest           "R (>= 3.0.0), stats, zoo"                                                                  
## logspline        NA                                                                                          
## loo              "R (>= 3.1.2)"                                                                              
## lubridate        "methods, R (>= 3.2)"                                                                       
## magrittr         "R (>= 3.4.0)"                                                                              
## mapdata          "R (>= 2.14.0), maps (>= 2.0-7)"                                                            
## mapproj          "R (>= 3.0.0), maps (>= 2.3-0)"                                                             
## maps             "R (>= 3.5.0)"                                                                              
## maptools         "R (>= 2.10), sp (>= 1.0-11)"                                                               
## markdown         "R (>= 2.11.1)"                                                                             
## MASS             "R (>= 3.3.0), grDevices, graphics, stats, utils"                                           
## mathjaxr         NA                                                                                          
## Matrix           "R (>= 3.5.0)"                                                                              
## MatrixModels     "R (>= 3.6.0)"                                                                              
## matrixStats      "R (>= 2.12.0)"                                                                             
## mc2d             "R (>= 2.10.0), mvtnorm"                                                                    
## memoise          NA                                                                                          
## metaBMA          "R (>= 3.4.0), Rcpp (>= 1.0.0), methods"                                                    
## metadat          "R (>= 4.0.0)"                                                                              
## metafor          "R (>= 4.0.0), methods, Matrix, metadat"                                                    
## metaplus         "R(>= 3.2.0)"                                                                               
## methods          NA                                                                                          
## mgcv             "R (>= 3.6.0), nlme (>= 3.1-64)"                                                            
## mime             NA                                                                                          
## minqa            NA                                                                                          
## mlt              "basefun (>= 1.1-2), variables (>= 1.1-0)"                                                  
## mnormt           "R (>= 2.2.0)"                                                                              
## modelr           "R (>= 3.2)"                                                                                
## modeltools       "stats, stats4"                                                                             
## mratios          "R (>= 2.12.0)"                                                                             
## MSwM             "methods, graphics, parallel"                                                               
## multcomp         "stats, graphics, mvtnorm (>= 1.0-10), survival (>= 2.39-4),\nTH.data (>= 1.0-2)"           
## multcompView     NA                                                                                          
## munsell          NA                                                                                          
## mvtnorm          "R(>= 3.5.0)"                                                                               
## nlme             "R (>= 3.5.0)"                                                                              
## nloptr           NA                                                                                          
## nnet             "R (>= 3.0.0), stats, utils"                                                                
## numDeriv         "R (>= 2.11.1)"                                                                             
## openssl          NA                                                                                          
## orthopolynom     "R (>= 2.0.1)"                                                                              
## packcircles      "R (>= 3.2)"                                                                                
## packrat          "R (>= 3.0.0)"                                                                              
## paletteer        "R (>= 2.10)"                                                                               
## palmerpenguins   "R (>= 2.10)"                                                                               
## parallel         NA                                                                                          
## parallelly       NA                                                                                          
## parameters       "R (>= 3.6)"                                                                                
## patchwork        NA                                                                                          
## pbapply          "R (>= 3.2.0)"                                                                              
## pbkrtest         "R (>= 3.5.0), lme4 (>= 1.1.10)"                                                            
## performance      "R (>= 3.6)"                                                                                
## permute          "R (>= 2.14.0)"                                                                             
## pillar           NA                                                                                          
## pkgbuild         "R (>= 3.1)"                                                                                
## pkgconfig        NA                                                                                          
## pkgload          "R (>= 3.4.0)"                                                                              
## plyr             "R (>= 3.1.0)"                                                                              
## PMCMRplus        "R (>= 3.5.0)"                                                                              
## png              "R (>= 2.9.0)"                                                                              
## polynom          NA                                                                                          
## praise           NA                                                                                          
## prettyunits      NA                                                                                          
## prismatic        "R (>= 3.2)"                                                                                
## processx         "R (>= 3.4.0)"                                                                              
## prodlim          "R (>= 2.9.0)"                                                                              
## progress         NA                                                                                          
## progressr        "R (>= 3.5.0)"                                                                              
## proxy            "R (>= 3.4.0)"                                                                              
## ps               "R (>= 3.4)"                                                                                
## psych            NA                                                                                          
## purrr            "R (>= 3.2)"                                                                                
## quadprog         "R (>= 3.1.0)"                                                                              
## quantmod         "R (>= 3.2.0), xts(>= 0.9-0), zoo, TTR(>= 0.2), methods"                                    
## quantreg         "R (>= 3.5), stats, SparseM"                                                                
## R6               "R (>= 3.0)"                                                                                
## rappdirs         "R (>= 3.2)"                                                                                
## rARPACK          NA                                                                                          
## raster           "sp (>= 1.4-5), R (>= 3.5.0)"                                                               
## rasterVis        "R (>= 3.0.0), methods, lattice (>= 0.20-41)"                                               
## RColorBrewer     "R (>= 2.0.0)"                                                                              
## Rcpp             NA                                                                                          
## RcppArmadillo    "R (>= 3.3.0)"                                                                              
## RcppEigen        NA                                                                                          
## RcppGSL          NA                                                                                          
## RcppParallel     "R (>= 3.0.2)"                                                                              
## RcppZiggurat     "R (>= 3.0.0)"                                                                              
## readr            "R (>= 3.4)"                                                                                
## readxl           "R (>= 3.4)"                                                                                
## recipes          "dplyr, R (>= 3.4)"                                                                         
## rematch          NA                                                                                          
## rematch2         NA                                                                                          
## remotes          "R (>= 3.0.0)"                                                                              
## reprex           "R (>= 3.4)"                                                                                
## reshape          "R (>= 2.6.1)"                                                                              
## reshape2         "R (>= 3.1)"                                                                                
## rex              NA                                                                                          
## Rfast            "R (>= 3.5.0), Rcpp (>= 0.12.3), RcppZiggurat"                                              
## rgdal            "R (>= 3.5.0), methods, sp (>= 1.1-0)"                                                      
## rlang            "R (>= 3.4.0)"                                                                              
## rmarkdown        "R (>= 3.0)"                                                                                
## Rmpfr            "gmp (>= 0.6-1), R (>= 3.5.0)"                                                              
## rngtools         "R (>= 3.2.0), methods"                                                                     
## robustbase       "R (>= 3.5.0)"                                                                              
## ROCR             "R (>= 3.6)"                                                                                
## rpart            "R (>= 2.15.0), graphics, stats, grDevices"                                                 
## rprojroot        "R (>= 3.0.0)"                                                                              
## rsconnect        "R (>= 3.0.0)"                                                                              
## RSpectra         "R (>= 3.0.2)"                                                                              
## rstan            "R (>= 3.4.0), StanHeaders (>= 2.21.0), ggplot2 (>= 3.0.0)"                                 
## rstantools       NA                                                                                          
## rstatix          "R (>= 3.3.0)"                                                                              
## rstudioapi       NA                                                                                          
## Rttf2pt1         "R (>= 2.15)"                                                                               
## rvest            "R (>= 3.2)"                                                                                
## s2               "R (>= 3.0.0)"                                                                              
## sandwich         "R (>= 3.0.0)"                                                                              
## sass             NA                                                                                          
## scales           "R (>= 3.2)"                                                                                
## selectr          "R (>= 3.0)"                                                                                
## sf               "methods, R (>= 3.3.0)"                                                                     
## shape            "R (>= 2.01)"                                                                               
## SimComp          NA                                                                                          
## sm               "R (>= 3.1.0)"                                                                              
## sp               "R (>= 3.0.0), methods"                                                                     
## SparseM          "R (>= 2.15), methods"                                                                      
## spatial          "R (>= 3.0.0), graphics, stats, utils"                                                      
## spelling         NA                                                                                          
## splines          NA                                                                                          
## SQUAREM          "R (>= 3.0)"                                                                                
## stabledist       "R (>= 3.1.0)"                                                                              
## StanHeaders      "R (>= 3.4.0)"                                                                              
## stats            NA                                                                                          
## stats4           NA                                                                                          
## statsExpressions "R (>= 4.0.0)"                                                                              
## stringi          "R (>= 3.1)"                                                                                
## stringr          "R (>= 3.1)"                                                                                
## strucchange      "R (>= 2.10.0), zoo, sandwich"                                                              
## SuppDists        "R (>= 3.3.0)"                                                                              
## survival         "R (>= 3.5.0)"                                                                              
## survPresmooth    "R(>= 3.0.1)"                                                                               
## svglite          "R (>= 3.0.0)"                                                                              
## sys              NA                                                                                          
## systemfonts      "R (>= 3.2.0)"                                                                              
## tcltk            NA                                                                                          
## terra            "R (>= 3.5.0)"                                                                              
## testthat         "R (>= 3.1)"                                                                                
## TH.data          "R (>= 3.5.0), survival, MASS"                                                              
## tibble           "R (>= 3.1.0)"                                                                              
## tidyr            "R (>= 3.1)"                                                                                
## tidyselect       "R (>= 3.4)"                                                                                
## tidyverse        "R (>= 3.3)"                                                                                
## timeDate         "R (>= 3.6.0)"                                                                              
## timeSeries       "R (>= 2.10), timeDate (>= 2150.95)"                                                        
## tinytex          NA                                                                                          
## TMB              "R (>= 3.0.0)"                                                                              
## tools            NA                                                                                          
## tram             "R (>= 3.5.0), mlt (>= 1.4-3)"                                                              
## tseries          "R (>= 2.10.0)"                                                                             
## TTR              NA                                                                                          
## tzdb             "R (>= 3.4.0)"                                                                              
## units            "R (>= 3.0.2)"                                                                              
## unmarked         "R (>= 2.12.0), methods"                                                                    
## urca             "R (>= 2.0.0), methods"                                                                     
## utf8             "R (>= 2.10)"                                                                               
## utils            NA                                                                                          
## uuid             "R (>= 2.9.0)"                                                                              
## variables        NA                                                                                          
## vars             "R (>= 2.0.0), MASS, strucchange, urca (>= 1.1-6), lmtest (>=\n0.9-26), sandwich (>= 2.2-4)"
## vctrs            "R (>= 3.3)"                                                                                
## vdiffr           "R (>= 3.2.0)"                                                                              
## vegan            "permute (>= 0.9-0), lattice, R (>= 3.4.0)"                                                 
## VGAM             "R (>= 3.5.0), methods, stats, stats4, splines"                                             
## vioplot          "sm, zoo"                                                                                   
## viridis          "R (>= 2.10), viridisLite (>= 0.4.0)"                                                       
## viridisLite      "R (>= 2.10)"                                                                               
## vroom            "R (>= 3.4)"                                                                                
## waldo            NA                                                                                          
## withr            "R (>= 3.2.0)"                                                                              
## wk               "R (>= 2.10)"                                                                               
## WRS2             "R (>= 3.2.0)"                                                                              
## xfun             NA                                                                                          
## xml2             "R (>= 3.1.0)"                                                                              
## xmlparsedata     "R (>= 3.0.0)"                                                                              
## xtable           "R (>= 2.10.0)"                                                                             
## xts              "zoo (>= 1.7-12)"                                                                           
## yaml             NA                                                                                          
## zeallot          NA                                                                                          
## zoo              "R (>= 3.1.0), stats"                                                                       
##                  Imports                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## abind            "methods, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## afex             "pbkrtest (>= 0.4-1), lmerTest (>= 3.0-0), car, reshape2,\nstats, methods, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## AICcmodavg       "methods, stats, graphics, lattice, MASS, Matrix, nlme, stats4,\nsurvival, unmarked, VGAM, xtable"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## alabama          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## askpass          "sys (>= 2.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## assertthat       "tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## backports        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## base             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## base64enc        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## basefun          "stats, polynom, Matrix, orthopolynom, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## BayesFactor      "pbapply, mvtnorm, stringr, utils, graphics, MatrixModels, Rcpp\n(>= 0.11.2), methods, hypergeo"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## bayestestR       "insight (>= 0.18.2), datawizard (>= 0.5.1), graphics, methods,\nstats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## BB               "stats, quadprog"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## bbmle            "stats, numDeriv, lattice, MASS, methods, bdsmatrix, Matrix,\nmvtnorm"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## bdsmatrix        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## BH               NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## bit              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## bit64            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## bitops           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## blob             "methods, rlang, vctrs (>= 0.2.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## boot             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## bridgesampling   "mvtnorm, Matrix, Brobdingnag, stringr, coda, parallel, scales,\nutils, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## brio             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## Brobdingnag      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## broom            "backports, dplyr (>= 1.0.0), ellipsis, generics (>= 0.0.2),\nglue, purrr, rlang, stringr, tibble (>= 3.0.0), tidyr (>=\n1.0.0), ggplot2"                                                                                                                                                                                                                                                                                                                                                                                                                                                
## bslib            "grDevices, htmltools (>= 0.5.2), jsonlite, sass (>= 0.4.0),\njquerylib (>= 0.1.3), rlang, cachem, memoise"                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## BWStest          "memoise, Rcpp (>= 0.12.3)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## cachem           "rlang, fastmap"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## callr            "processx (>= 3.6.1), R6, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## car              "abind, MASS, mgcv, nnet, pbkrtest (>= 0.4-4), quantreg,\ngrDevices, utils, stats, graphics, lme4 (>= 1.1-27.1), nlme,\nscales"                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## carData          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## cartogram        "methods, sf, packcircles"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## caTools          "bitops"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## cellranger       "rematch, tibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## changepoint      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## checkmate        "backports (>= 1.1.0), utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## class            "MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## classInt         "grDevices, stats, graphics, e1071, class, KernSmooth"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## cli              "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## clipr            "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## cluster          "graphics, grDevices, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## coda             "lattice"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## codetools        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## coin             "methods, parallel, stats, stats4, utils, libcoin (>= 1.0-9),\nmatrixStats (>= 0.54.0), modeltools (>= 0.2-9), mvtnorm (>=\n1.0-5), multcomp"                                                                                                                                                                                                                                                                                                                                                                                                                                            
## colorspace       "graphics, grDevices, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## commonmark       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## compiler         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## coneproj         "Rcpp (>= 0.10.4)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## contfrac         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## correlation      "bayestestR (>= 0.13.0), datasets, datawizard (>= 0.5.1),\ninsight (>= 0.18.4), parameters (>= 0.18.2), stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## corrplot         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## covr             "digest, stats, utils, jsonlite, rex, httr, crayon, withr (>=\n1.0.2), yaml"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## cowplot          "ggplot2 (> 2.2.1), grid, gtable, grDevices, methods, rlang,\nscales"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## coxme            "nlme, Matrix (>= 1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## cpp11            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## crayon           "grDevices, methods, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## curl             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## cyclocomp        "callr, crayon, desc, remotes, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## data.table       "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## datasets         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## datawizard       "insight (>= 0.18.5), stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## DBI              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## dbplyr           "assertthat (>= 0.2.0), blob (>= 1.2.0), cli (>= 3.3.0), DBI\n(>= 1.0.0), dplyr (>= 1.0.9), glue (>= 1.2.0), lifecycle (>=\n1.0.0), magrittr, methods, pillar (>= 1.5.0), purrr (>= 0.2.5),\nR6 (>= 2.2.2), rlang (>= 1.0.0), tibble (>= 1.4.2), tidyselect\n(>= 0.2.4), utils, vctrs (>= 0.4.1), withr"                                                                                                                                                                                                                                                                                 
## deldir           "graphics, grDevices"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## DEoptimR         "stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## desc             "cli, R6, rprojroot, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## deSolve          "methods, graphics, grDevices, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## dichromat        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## diffobj          "crayon (>= 1.3.2), tools, methods, utils, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## digest           "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## doParallel       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## doRNG            "stats, utils, iterators"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## dplyr            "generics, glue (>= 1.3.2), lifecycle (>= 1.0.1), magrittr (>=\n1.5), methods, R6, rlang (>= 1.0.2), tibble (>= 2.1.3),\ntidyselect (>= 1.1.1), utils, vctrs (>= 0.4.1), pillar (>=\n1.5.1)"                                                                                                                                                                                                                                                                                                                                                                                             
## dreamerr         "Formula, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## dtplyr           "crayon, data.table (>= 1.13.0), dplyr (>= 1.0.3), ellipsis,\nglue, lifecycle, rlang, tibble, tidyselect, vctrs"                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## e1071            "graphics, grDevices, class, stats, methods, utils, proxy"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## effectsize       "bayestestR (>= 0.13.0), insight (>= 0.18.4), parameters (>=\n0.19.0), performance (>= 0.10.0), datawizard (>= 0.6.2), stats,\nutils"                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## ellipsis         "rlang (>= 0.3.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## elliptic         "MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## evaluate         "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## extrafont        "extrafontdb, grDevices, utils, Rttf2pt1"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## extrafontdb      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## fansi            "grDevices, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## farver           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## fastGHQuad       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## fastICA          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## fastmap          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## fBasics          "timeDate, timeSeries, stats, grDevices, graphics, methods,\nutils, MASS, spatial, gss, stabledist"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## feather          "Rcpp, tibble (>= 2.0.0), hms"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## fGarch           "fBasics, timeDate, timeSeries, fastICA, Matrix (>= 1.5-0),\ngraphics, methods, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## fixest           "stats, graphics, grDevices, tools, utils, methods, numDeriv,\nnlme, sandwich, Rcpp(>= 1.0.5), dreamerr(>= 1.2.3)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## forcats          "cli, ellipsis, glue, lifecycle, magrittr, rlang (>= 1.0.0),\ntibble, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## foreach          "codetools, utils, iterators"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## forecast         "colorspace, fracdiff, generics (>= 0.1.2), ggplot2 (>= 2.2.1),\ngraphics, lmtest, magrittr, nnet, parallel, Rcpp (>= 0.11.0),\nstats, timeDate, tseries, urca, zoo"                                                                                                                                                                                                                                                                                                                                                                                                                     
## foreign          "methods, utils, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## Formula          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## fracdiff         "stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## fs               "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## future           "digest, globals (>= 0.16.0), listenv (>= 0.8.0), parallel,\nparallelly (>= 1.32.1), tools, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## future.apply     "globals (>= 0.16.1), parallel, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## gapminder        "tibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## gargle           "cli (>= 3.0.0), fs (>= 1.3.1), glue (>= 1.3.0), httr (>=\n1.4.0), jsonlite, rappdirs, rlang (>= 1.0.0), rstudioapi,\nstats, utils, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                               
## gcookbook        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## gdtools          "Rcpp (>= 0.12.12), systemfonts (>= 0.1.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## generics         "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## ggcorrplot       "reshape2, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## ggfortify        "dplyr (>= 0.3), tidyr, gridExtra, grid, scales, stringr,\ntibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## ggplot2          "cli, glue, grDevices, grid, gtable (>= 0.1.1), isoband,\nlifecycle (> 1.0.1), MASS, mgcv, rlang (>= 1.0.0), scales (>=\n1.2.0), stats, tibble, vctrs (>= 0.5.0), withr (>= 2.5.0)"                                                                                                                                                                                                                                                                                                                                                                                                      
## ggplot2movies    NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## ggpubr           "ggrepel, grid, ggsci, stats, utils, tidyr, purrr, dplyr (>=\n0.7.1), cowplot, ggsignif, scales, gridExtra, glue, polynom,\nrlang (>= 0.4.6), rstatix (>= 0.7.1), tibble, magrittr"                                                                                                                                                                                                                                                                                                                                                                                                      
## ggrepel          "grid, Rcpp, rlang (>= 0.3.0), scales (>= 0.5.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## ggridges         "ggplot2 (>= 3.0.0), grid (>= 3.0.0), scales (>= 0.4.1), withr\n(>= 2.1.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## ggsci            "grDevices, scales, ggplot2 (>= 2.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## ggside           "grid, gtable, rlang, scales, glue, stats, tibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## ggsignif         "ggplot2 (>= 3.3.5)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## ggstatsplot      "correlation (>= 0.8.3), datawizard (>= 0.6.2), dplyr, ggplot2,\nggrepel, ggsignif, glue, insight (>= 0.18.5), paletteer,\nparameters (>= 0.19.0), patchwork, performance (>= 0.10.0),\npurrr, rlang, stats, statsExpressions (>= 1.3.4), tidyr, utils"                                                                                                                                                                                                                                                                                                                                  
## glmnet           "methods, utils, foreach, shape, survival, Rcpp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## globals          "codetools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## glue             "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## gmp              "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## googledrive      "cli (>= 3.0.0), gargle (>= 1.2.0), glue (>= 1.4.2), httr,\njsonlite, lifecycle, magrittr, pillar, purrr (>= 0.2.3), rlang\n(>= 0.4.9), tibble (>= 2.0.0), utils, uuid, vctrs (>= 0.3.0),\nwithr"                                                                                                                                                                                                                                                                                                                                                                                        
## googlesheets4    "cellranger, cli (>= 3.0.0), curl, gargle (>= 1.2.0), glue (>=\n1.3.0), googledrive (>= 2.0.0), httr, ids, magrittr, methods,\npurrr, rematch2, rlang (>= 1.0.2), tibble (>= 2.1.1), utils,\nvctrs (>= 0.2.3)"                                                                                                                                                                                                                                                                                                                                                                           
## gower            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## gplots           "gtools, stats, caTools, KernSmooth, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## graphics         "grDevices"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## grDevices        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## grid             "grDevices, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## gridExtra        "gtable, grid, grDevices, graphics, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## gss              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## gtable           "grid"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## gtools           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## hardhat          "glue (>= 1.6.2), rlang (>= 1.0.3), tibble (>= 3.1.7), vctrs\n(>= 0.4.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## haven            "cli (>= 3.0.0), forcats (>= 0.2.0), hms, lifecycle, methods,\nreadr (>= 0.1.0), rlang (>= 0.4.0), tibble, tidyselect, vctrs\n(>= 0.3.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                
## hexbin           "lattice, grid, graphics, grDevices, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## highr            "xfun (>= 0.18)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## hms              "ellipsis (>= 0.3.2), lifecycle, methods, pkgconfig, rlang,\nvctrs (>= 0.3.8)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## hrbrthemes       "ggplot2 (>= 3.3.0), grDevices, grid, scales, extrafont, knitr,\nrmarkdown, htmltools, tools, magrittr, gdtools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## htmltools        "utils, digest, grDevices, base64enc, rlang (>= 0.4.10),\nfastmap (>= 1.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## httr             "curl (>= 3.0.0), jsonlite, mime, openssl (>= 0.8), R6"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## hunspell         "Rcpp, digest"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## hypergeo         "elliptic (>= 1.3-5), contfrac (>= 1.1-9), deSolve"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## ids              "openssl, uuid"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## inline           "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## insight          "methods, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## interp           "Rcpp (>= 0.12.9), deldir"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## ipred            "rpart (>= 3.1-8), MASS, survival, nnet, class, prodlim"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## isoband          "grid, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## ISwR             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## iterators        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## jpeg             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## jquerylib        "htmltools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## jsonlite         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## KernSmooth       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## KFAS             "stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## knitr            "evaluate (>= 0.15), highr, methods, stringr (>= 0.6), yaml (>=\n2.1.19), xfun (>= 0.29), tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## kSamples         "methods, graphics, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## labeling         "stats, graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## LaplacesDemon    "parallel, grDevices, graphics, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## lattice          "grid, grDevices, graphics, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## latticeExtra     "grid, stats, utils, grDevices, png, jpeg, RColorBrewer,\ninterp, MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## lava             "future.apply, grDevices, graphics, methods, numDeriv,\nprogressr, stats, survival, SQUAREM, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## lazyeval         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## lfda             "plyr, grDevices, rARPACK"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## libcoin          "stats, mvtnorm"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## lifecycle        "cli (>= 3.4.0), glue, rlang (>= 1.0.6)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## lintr            "backports, codetools, crayon, cyclocomp, digest, glue,\njsonlite, knitr, rex, stats, utils, xml2 (>= 1.0.0),\nxmlparsedata (>= 1.0.5)"                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## listenv          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## lme4             "graphics, grid, splines, utils, parallel, MASS, lattice, boot,\nnlme (>= 3.1-123), minqa (>= 1.1.15), nloptr (>= 1.0.4)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## lmerTest         "numDeriv, MASS, ggplot2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## lmtest           "graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## logspline        "stats, graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## loo              "checkmate, matrixStats (>= 0.52), parallel, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## lubridate        "generics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## magrittr         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## mapdata          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## mapproj          "stats, graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## maps             "graphics, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## maptools         "foreign (>= 0.8), methods, grid, lattice, stats, utils,\ngrDevices"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## markdown         "utils, xfun, mime (>= 0.3)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## MASS             "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## mathjaxr         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## Matrix           "methods, graphics, grid, stats, utils, lattice"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## MatrixModels     "stats, methods, Matrix (>= 1.4-2)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## matrixStats      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## mc2d             "stats, grDevices, graphics, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## memoise          "rlang (>= 0.4.10), cachem"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## metaBMA          "bridgesampling, coda, LaplacesDemon, logspline, mvtnorm,\nRcppParallel (>= 5.0.1), rstan (>= 2.18.1), rstantools (>=\n2.1.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## metadat          "utils, tools, mathjaxr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## metafor          "stats, utils, graphics, grDevices, nlme, mathjaxr, pbapply"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## metaplus         "bbmle, metafor, boot, methods, numDeriv, MASS, graphics,\nstats, fastGHQuad, lme4, Rfast, parallel, doParallel, foreach,\ndoRNG"                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## methods          "utils, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## mgcv             "methods, stats, graphics, Matrix, splines, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## mime             "tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## minqa            "Rcpp (>= 0.9.10)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## mlt              "BB, alabama, stats, coneproj, graphics, methods, grDevices,\nsandwich, numDeriv, survival, Matrix"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## mnormt           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## modelr           "broom, magrittr, purrr (>= 0.2.2), rlang (>= 0.2.0), tibble,\ntidyr (>= 0.8.0), tidyselect, vctrs"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## modeltools       "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## mratios          "mvtnorm, multcomp, survival, survPresmooth, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## MSwM             "nlme"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## multcomp         "sandwich (>= 2.3-0), codetools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## multcompView     "grid"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## munsell          "colorspace, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## mvtnorm          "stats, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## nlme             "graphics, stats, utils, lattice"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## nloptr           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## nnet             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## numDeriv         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## openssl          "askpass"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## orthopolynom     "polynom, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## packcircles      "Rcpp (>= 1.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## packrat          "tools, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## paletteer        "prismatic, rematch2, rlang, rstudioapi"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## palmerpenguins   NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## parallel         "tools, compiler"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## parallelly       "parallel, tools, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## parameters       "bayestestR (>= 0.12.1), datawizard (>= 0.6.0), insight (>=\n0.18.3), graphics, methods, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## patchwork        "ggplot2 (>= 3.0.0), gtable, grid, stats, grDevices, utils,\ngraphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## pbapply          "parallel"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## pbkrtest         "broom, dplyr, magrittr, MASS, Matrix (>= 1.2.3), methods,\nnumDeriv, parallel, knitr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## performance      "bayestestR (>= 0.12.0), insight (>= 0.18.3), datawizard (>=\n0.5.1), methods, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## permute          "stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## pillar           "cli (>= 2.3.0), fansi, glue, lifecycle, rlang (>= 1.0.2), utf8\n(>= 1.1.0), utils, vctrs (>= 0.3.8)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## pkgbuild         "callr (>= 3.2.0), cli, crayon, desc, prettyunits, R6,\nrprojroot, withr (>= 2.3.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## pkgconfig        "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## pkgload          "cli (>= 3.3.0), crayon, desc, fs, glue, methods, rlang (>=\n1.0.3), rprojroot, utils, withr (>= 2.4.3)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## plyr             "Rcpp (>= 0.11.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## PMCMRplus        "mvtnorm (>= 1.0), multcompView, gmp, Rmpfr, SuppDists,\nkSamples (>= 1.2.7), BWStest (>= 0.2.1), MASS, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## png              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## polynom          "stats, graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## praise           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## prettyunits      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## prismatic        "graphics, farver (>= 2.0.1), grDevices"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## processx         "ps (>= 1.2.0), R6, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## prodlim          "Rcpp (>= 0.11.5), stats, grDevices, graphics, survival,\nKernSmooth, lava"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## progress         "hms, prettyunits, R6, crayon"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## progressr        "digest, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## proxy            "stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## ps               "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## psych            "mnormt,parallel,stats,graphics,grDevices,methods,lattice,nlme"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## purrr            "magrittr (>= 1.5), rlang (>= 0.3.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## quadprog         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## quantmod         "curl"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## quantreg         "methods, graphics, Matrix, MatrixModels, survival, MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## R6               NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rappdirs         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rARPACK          "RSpectra"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## raster           "Rcpp, methods, terra (>= 1.6-16)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rasterVis        "raster (>= 3.4-13), terra (>= 1.4-9), latticeExtra, stats,\nutils, parallel, grid, grDevices, RColorBrewer, hexbin, sp (>=\n1.0-6), zoo, viridisLite"                                                                                                                                                                                                                                                                                                                                                                                                                                   
## RColorBrewer     NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## Rcpp             "methods, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## RcppArmadillo    "Rcpp (>= 0.11.0), stats, utils, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## RcppEigen        "Matrix (>= 1.1-0), Rcpp (>= 0.11.0), stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## RcppGSL          "Rcpp (>= 0.11.0), stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## RcppParallel     NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## RcppZiggurat     "Rcpp, parallel, graphics, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## readr            "cli (>= 3.2.0), clipr, crayon, hms (>= 0.4.1), lifecycle (>=\n0.2.0), methods, R6, rlang, tibble, utils, vroom (>= 1.6.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## readxl           "cellranger, tibble (>= 2.0.1), utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## recipes          "cli, ellipsis, generics (>= 0.1.2), glue, gower, hardhat (>=\n1.2.0), ipred (>= 0.9-12), lifecycle (>= 1.0.3), lubridate (>=\n1.8.0), magrittr, Matrix, purrr (>= 0.2.3), rlang (>= 1.0.3),\nstats, tibble, tidyr (>= 1.0.0), tidyselect (>= 1.2.0),\ntimeDate, utils, vctrs, withr"                                                                                                                                                                                                                                                                                                    
## rematch          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rematch2         "tibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## remotes          "methods, stats, tools, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## reprex           "callr (>= 3.6.0), cli (>= 3.2.0), clipr (>= 0.4.0), fs, glue,\nknitr (>= 1.23), lifecycle, rlang (>= 1.0.0), rmarkdown,\nrstudioapi, utils, withr (>= 2.3.0)"                                                                                                                                                                                                                                                                                                                                                                                                                           
## reshape          "plyr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## reshape2         "plyr (>= 1.8.1), Rcpp, stringr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## rex              "lazyeval"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## Rfast            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rgdal            "grDevices, graphics, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## rlang            "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## rmarkdown        "bslib (>= 0.2.5.1), evaluate (>= 0.13), htmltools (>= 0.5.1),\njquerylib, jsonlite, knitr (>= 1.22), methods, stringr (>=\n1.2.0), tinytex (>= 0.31), tools, utils, xfun (>= 0.30), yaml\n(>= 2.1.19)"                                                                                                                                                                                                                                                                                                                                                                                  
## Rmpfr            "stats, utils, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## rngtools         "digest, utils, stats, parallel"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## robustbase       "stats, graphics, utils, methods, DEoptimR"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## ROCR             "methods, graphics, grDevices, gplots, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## rpart            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rprojroot        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rsconnect        "curl, digest, jsonlite, openssl (>= 2.0.0), packrat (>= 0.6),\nrstudioapi (>= 0.5), tools, yaml (>= 2.1.5)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## RSpectra         "Matrix (>= 1.1-0), Rcpp (>= 0.11.5)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## rstan            "methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=\n0.12.0), RcppParallel (>= 5.0.1), loo (>= 2.3.0), pkgbuild"                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## rstantools       "desc, stats, utils, Rcpp (>= 0.12.16), RcppParallel (>= 5.0.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## rstatix          "stats, utils, tidyr (>= 1.0.0), purrr, broom (>= 0.7.4), rlang\n(>= 0.3.1), tibble (>= 2.1.3), dplyr (>= 0.7.1), magrittr,\ncorrplot, tidyselect (>= 1.0.0), car, generics (>= 0.0.2)"                                                                                                                                                                                                                                                                                                                                                                                                  
## rstudioapi       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## Rttf2pt1         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rvest            "glue, cli, httr (>= 0.5), lifecycle (>= 1.0.0), magrittr,\nrlang (>= 1.0.0), selectr, tibble, xml2 (>= 1.3), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## s2               "Rcpp, wk (>= 0.6.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## sandwich         "stats, utils, zoo"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## sass             "fs, rlang (>= 0.4.10), htmltools (>= 0.5.1), R6, rappdirs"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## scales           "farver (>= 2.0.3), labeling, lifecycle, munsell (>= 0.5), R6,\nRColorBrewer, rlang (>= 1.0.0), viridisLite"                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## selectr          "methods, stringr, R6"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## sf               "classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,\nmagrittr, Rcpp (>= 0.12.18), s2 (>= 1.0.7), stats, tools, units\n(>= 0.7-0), utils"                                                                                                                                                                                                                                                                                                                                                                                                                                      
## shape            "stats, graphics, grDevices"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## SimComp          "mvtnorm, multcomp, mratios, graphics, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## sm               NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## sp               "utils, stats, graphics, grDevices, lattice, grid"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## SparseM          "graphics, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## spatial          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## spelling         "commonmark, xml2, hunspell (>= 3.0), knitr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## splines          "graphics, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## SQUAREM          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## stabledist       "stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## StanHeaders      "RcppParallel (>= 5.0.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## stats            "utils, grDevices, graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## stats4           "graphics, methods, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## statsExpressions "BayesFactor (>= 0.9.12-4.4), correlation (>= 0.8.3),\ndatawizard (>= 0.6.2), dplyr, effectsize (>= 0.8.0), glue,\ninsight (>= 0.18.4), magrittr, parameters (>= 0.19.0),\nperformance (>= 0.10.0), rlang, stats, tibble, tidyr, WRS2 (>=\n1.1-4), zeallot"                                                                                                                                                                                                                                                                                                                              
## stringi          "tools, utils, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## stringr          "glue (>= 1.2.0), magrittr, stringi (>= 1.1.7)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## strucchange      "graphics, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## SuppDists        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## survival         "graphics, Matrix, methods, splines, stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## survPresmooth    NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## svglite          "systemfonts (>= 1.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## sys              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## systemfonts      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## tcltk            "utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## terra            "methods, Rcpp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## testthat         "brio, callr (>= 3.5.1), cli (>= 3.4.0), desc, digest, ellipsis\n(>= 0.2.0), evaluate, jsonlite, lifecycle, magrittr, methods,\npkgload, praise, processx, ps (>= 1.3.4), R6 (>= 2.2.0), rlang\n(>= 1.0.1), utils, waldo (>= 0.4.0), withr (>= 2.4.3)"                                                                                                                                                                                                                                                                                                                                   
## TH.data          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## tibble           "fansi (>= 0.4.0), lifecycle (>= 1.0.0), magrittr, methods,\npillar (>= 1.7.0), pkgconfig, rlang (>= 1.0.2), utils, vctrs\n(>= 0.3.8)"                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## tidyr            "dplyr (>= 1.0.0), ellipsis (>= 0.1.0), glue, lifecycle,\nmagrittr, purrr, rlang, tibble (>= 2.1.1), tidyselect (>=\n1.1.0), utils, vctrs (>= 0.3.7)"                                                                                                                                                                                                                                                                                                                                                                                                                                    
## tidyselect       "cli (>= 3.3.0), glue (>= 1.3.0), lifecycle (>= 1.0.3), rlang\n(>= 1.0.4), vctrs (>= 0.4.1), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## tidyverse        "broom (>= 0.7.10), cli (>= 3.1.0), crayon (>= 1.4.2), dbplyr\n(>= 2.1.1), dplyr (>= 1.0.7), dtplyr (>= 1.2.0), forcats (>=\n0.5.1), ggplot2 (>= 3.3.5), googledrive (>= 2.0.0),\ngooglesheets4 (>= 1.0.0), haven (>= 2.4.3), hms (>= 1.1.1),\nhttr (>= 1.4.2), jsonlite (>= 1.7.2), lubridate (>= 1.8.0),\nmagrittr (>= 2.0.1), modelr (>= 0.1.8), pillar (>= 1.6.4),\npurrr (>= 0.3.4), readr (>= 2.1.1), readxl (>= 1.3.1), reprex\n(>= 2.0.1), rlang (>= 0.4.12), rstudioapi (>= 0.13), rvest (>=\n1.0.2), stringr (>= 1.4.0), tibble (>= 3.1.6), tidyr (>=\n1.1.4), xml2 (>= 1.3.3)"
## timeDate         "graphics, utils, stats, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## timeSeries       "graphics, grDevices, stats, utils, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## tinytex          "xfun (>= 0.29)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## TMB              "graphics, methods, stats, utils, Matrix (>= 1.0-12)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## tools            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## tram             "Formula, multcomp, variables (>= 1.0-4), basefun (>= 1.1-2),\nsandwich, stats, survival, graphics, Matrix, methods, mvtnorm"                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## tseries          "graphics, stats, utils, quadprog, zoo, quantmod (>= 0.4-9)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## TTR              "xts (>= 0.10-0), zoo, curl"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## tzdb             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## units            "Rcpp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## unmarked         "graphics, lattice, lme4, MASS, Matrix, parallel, pbapply,\nplyr, Rcpp (>= 0.8.0), stats, TMB (>= 1.7.18), utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## urca             "nlme, graphics, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## utf8             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## utils            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## uuid             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## variables        "stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## vars             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## vctrs            "cli (>= 3.4.0), glue, lifecycle (>= 1.0.3), rlang (>= 1.0.6)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## vdiffr           "diffobj, glue, grDevices, htmltools, lifecycle, rlang,\ntestthat (>= 3.0.3), xml2 (>= 1.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## vegan            "MASS, cluster, mgcv"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## VGAM             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## vioplot          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## viridis          "stats, ggplot2 (>= 1.0.1), gridExtra"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## viridisLite      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## vroom            "bit64, cli (>= 3.2.0), crayon, glue, hms, lifecycle, methods,\nrlang (>= 0.4.2), stats, tibble (>= 2.0.0), tidyselect, tzdb\n(>= 0.1.1), vctrs (>= 0.2.0), withr"                                                                                                                                                                                                                                                                                                                                                                                                                       
## waldo            "cli, diffobj (>= 0.3.4), fansi, glue, methods, rematch2, rlang\n(>= 1.0.0), tibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## withr            "graphics, grDevices, stats"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## wk               NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## WRS2             "MASS, reshape, plyr, stats, graphics, grDevices, utils, mc2d"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## xfun             "stats, tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## xml2             "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## xmlparsedata     NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## xtable           "stats, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## xts              "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## yaml             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## zeallot          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## zoo              "utils, graphics, grDevices, lattice (>= 0.20-27)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##                  LinkingTo                                                                                                                         
## abind            NA                                                                                                                                
## afex             NA                                                                                                                                
## AICcmodavg       NA                                                                                                                                
## alabama          NA                                                                                                                                
## askpass          NA                                                                                                                                
## assertthat       NA                                                                                                                                
## backports        NA                                                                                                                                
## base             NA                                                                                                                                
## base64enc        NA                                                                                                                                
## basefun          NA                                                                                                                                
## BayesFactor      "Rcpp (>= 0.11.2), RcppEigen (>= 0.3.2.2.0)"                                                                                      
## bayestestR       NA                                                                                                                                
## BB               NA                                                                                                                                
## bbmle            NA                                                                                                                                
## bdsmatrix        NA                                                                                                                                
## BH               NA                                                                                                                                
## bit              NA                                                                                                                                
## bit64            NA                                                                                                                                
## bitops           NA                                                                                                                                
## blob             NA                                                                                                                                
## boot             NA                                                                                                                                
## bridgesampling   NA                                                                                                                                
## brio             NA                                                                                                                                
## Brobdingnag      NA                                                                                                                                
## broom            NA                                                                                                                                
## bslib            NA                                                                                                                                
## BWStest          "Rcpp"                                                                                                                            
## cachem           NA                                                                                                                                
## callr            NA                                                                                                                                
## car              NA                                                                                                                                
## carData          NA                                                                                                                                
## cartogram        NA                                                                                                                                
## caTools          NA                                                                                                                                
## cellranger       NA                                                                                                                                
## changepoint      NA                                                                                                                                
## checkmate        NA                                                                                                                                
## class            NA                                                                                                                                
## classInt         NA                                                                                                                                
## cli              NA                                                                                                                                
## clipr            NA                                                                                                                                
## cluster          NA                                                                                                                                
## coda             NA                                                                                                                                
## codetools        NA                                                                                                                                
## coin             "libcoin (>= 1.0-9)"                                                                                                              
## colorspace       NA                                                                                                                                
## commonmark       NA                                                                                                                                
## compiler         NA                                                                                                                                
## coneproj         "RcppArmadillo, Rcpp"                                                                                                             
## contfrac         NA                                                                                                                                
## correlation      NA                                                                                                                                
## corrplot         NA                                                                                                                                
## covr             NA                                                                                                                                
## cowplot          NA                                                                                                                                
## coxme            "bdsmatrix"                                                                                                                       
## cpp11            NA                                                                                                                                
## crayon           NA                                                                                                                                
## curl             NA                                                                                                                                
## cyclocomp        NA                                                                                                                                
## data.table       NA                                                                                                                                
## datasets         NA                                                                                                                                
## datawizard       NA                                                                                                                                
## DBI              NA                                                                                                                                
## dbplyr           NA                                                                                                                                
## deldir           NA                                                                                                                                
## DEoptimR         NA                                                                                                                                
## desc             NA                                                                                                                                
## deSolve          NA                                                                                                                                
## dichromat        NA                                                                                                                                
## diffobj          NA                                                                                                                                
## digest           NA                                                                                                                                
## doParallel       NA                                                                                                                                
## doRNG            NA                                                                                                                                
## dplyr            NA                                                                                                                                
## dreamerr         NA                                                                                                                                
## dtplyr           NA                                                                                                                                
## e1071            NA                                                                                                                                
## effectsize       NA                                                                                                                                
## ellipsis         NA                                                                                                                                
## elliptic         NA                                                                                                                                
## evaluate         NA                                                                                                                                
## extrafont        NA                                                                                                                                
## extrafontdb      NA                                                                                                                                
## fansi            NA                                                                                                                                
## farver           NA                                                                                                                                
## fastGHQuad       "Rcpp"                                                                                                                            
## fastICA          NA                                                                                                                                
## fastmap          NA                                                                                                                                
## fBasics          NA                                                                                                                                
## feather          "Rcpp"                                                                                                                            
## fGarch           NA                                                                                                                                
## fixest           "Rcpp"                                                                                                                            
## forcats          NA                                                                                                                                
## foreach          NA                                                                                                                                
## forecast         "Rcpp (>= 0.11.0), RcppArmadillo (>= 0.2.35)"                                                                                     
## foreign          NA                                                                                                                                
## Formula          NA                                                                                                                                
## fracdiff         NA                                                                                                                                
## fs               NA                                                                                                                                
## future           NA                                                                                                                                
## future.apply     NA                                                                                                                                
## gapminder        NA                                                                                                                                
## gargle           NA                                                                                                                                
## gcookbook        NA                                                                                                                                
## gdtools          "Rcpp"                                                                                                                            
## generics         NA                                                                                                                                
## ggcorrplot       NA                                                                                                                                
## ggfortify        NA                                                                                                                                
## ggplot2          NA                                                                                                                                
## ggplot2movies    NA                                                                                                                                
## ggpubr           NA                                                                                                                                
## ggrepel          "Rcpp"                                                                                                                            
## ggridges         NA                                                                                                                                
## ggsci            NA                                                                                                                                
## ggside           NA                                                                                                                                
## ggsignif         NA                                                                                                                                
## ggstatsplot      NA                                                                                                                                
## glmnet           "RcppEigen, Rcpp"                                                                                                                 
## globals          NA                                                                                                                                
## glue             NA                                                                                                                                
## gmp              NA                                                                                                                                
## googledrive      NA                                                                                                                                
## googlesheets4    NA                                                                                                                                
## gower            NA                                                                                                                                
## gplots           NA                                                                                                                                
## graphics         NA                                                                                                                                
## grDevices        NA                                                                                                                                
## grid             NA                                                                                                                                
## gridExtra        NA                                                                                                                                
## gss              NA                                                                                                                                
## gtable           NA                                                                                                                                
## gtools           NA                                                                                                                                
## hardhat          NA                                                                                                                                
## haven            "cpp11"                                                                                                                           
## hexbin           NA                                                                                                                                
## highr            NA                                                                                                                                
## hms              NA                                                                                                                                
## hrbrthemes       NA                                                                                                                                
## htmltools        NA                                                                                                                                
## httr             NA                                                                                                                                
## hunspell         "Rcpp (>= 0.12.12)"                                                                                                               
## hypergeo         NA                                                                                                                                
## ids              NA                                                                                                                                
## inline           NA                                                                                                                                
## insight          NA                                                                                                                                
## interp           "Rcpp, RcppEigen"                                                                                                                 
## ipred            NA                                                                                                                                
## isoband          NA                                                                                                                                
## ISwR             NA                                                                                                                                
## iterators        NA                                                                                                                                
## jpeg             NA                                                                                                                                
## jquerylib        NA                                                                                                                                
## jsonlite         NA                                                                                                                                
## KernSmooth       NA                                                                                                                                
## KFAS             NA                                                                                                                                
## knitr            NA                                                                                                                                
## kSamples         NA                                                                                                                                
## labeling         NA                                                                                                                                
## LaplacesDemon    NA                                                                                                                                
## lattice          NA                                                                                                                                
## latticeExtra     NA                                                                                                                                
## lava             NA                                                                                                                                
## lazyeval         NA                                                                                                                                
## lfda             NA                                                                                                                                
## libcoin          "mvtnorm"                                                                                                                         
## lifecycle        NA                                                                                                                                
## lintr            NA                                                                                                                                
## listenv          NA                                                                                                                                
## lme4             "Rcpp (>= 0.10.5), RcppEigen"                                                                                                     
## lmerTest         NA                                                                                                                                
## lmtest           NA                                                                                                                                
## logspline        NA                                                                                                                                
## loo              NA                                                                                                                                
## lubridate        "cpp11 (>= 0.2.7)"                                                                                                                
## magrittr         NA                                                                                                                                
## mapdata          NA                                                                                                                                
## mapproj          NA                                                                                                                                
## maps             NA                                                                                                                                
## maptools         NA                                                                                                                                
## markdown         NA                                                                                                                                
## MASS             NA                                                                                                                                
## mathjaxr         NA                                                                                                                                
## Matrix           NA                                                                                                                                
## MatrixModels     NA                                                                                                                                
## matrixStats      NA                                                                                                                                
## mc2d             NA                                                                                                                                
## memoise          NA                                                                                                                                
## metaBMA          "BH (>= 1.66.0), Rcpp (>= 1.0.0), RcppEigen (>= 0.3.3.3.0),\nRcppParallel (>= 5.0.1), rstan (>= 2.18.1), StanHeaders (>=\n2.18.0)"
## metadat          NA                                                                                                                                
## metafor          NA                                                                                                                                
## metaplus         NA                                                                                                                                
## methods          NA                                                                                                                                
## mgcv             NA                                                                                                                                
## mime             NA                                                                                                                                
## minqa            "Rcpp"                                                                                                                            
## mlt              NA                                                                                                                                
## mnormt           NA                                                                                                                                
## modelr           NA                                                                                                                                
## modeltools       NA                                                                                                                                
## mratios          NA                                                                                                                                
## MSwM             NA                                                                                                                                
## multcomp         NA                                                                                                                                
## multcompView     NA                                                                                                                                
## munsell          NA                                                                                                                                
## mvtnorm          NA                                                                                                                                
## nlme             NA                                                                                                                                
## nloptr           "testthat"                                                                                                                        
## nnet             NA                                                                                                                                
## numDeriv         NA                                                                                                                                
## openssl          NA                                                                                                                                
## orthopolynom     NA                                                                                                                                
## packcircles      "Rcpp (>= 1.0.0)"                                                                                                                 
## packrat          NA                                                                                                                                
## paletteer        NA                                                                                                                                
## palmerpenguins   NA                                                                                                                                
## parallel         NA                                                                                                                                
## parallelly       NA                                                                                                                                
## parameters       NA                                                                                                                                
## patchwork        NA                                                                                                                                
## pbapply          NA                                                                                                                                
## pbkrtest         NA                                                                                                                                
## performance      NA                                                                                                                                
## permute          NA                                                                                                                                
## pillar           NA                                                                                                                                
## pkgbuild         NA                                                                                                                                
## pkgconfig        NA                                                                                                                                
## pkgload          NA                                                                                                                                
## plyr             "Rcpp"                                                                                                                            
## PMCMRplus        NA                                                                                                                                
## png              NA                                                                                                                                
## polynom          NA                                                                                                                                
## praise           NA                                                                                                                                
## prettyunits      NA                                                                                                                                
## prismatic        NA                                                                                                                                
## processx         NA                                                                                                                                
## prodlim          "Rcpp"                                                                                                                            
## progress         NA                                                                                                                                
## progressr        NA                                                                                                                                
## proxy            NA                                                                                                                                
## ps               NA                                                                                                                                
## psych            NA                                                                                                                                
## purrr            NA                                                                                                                                
## quadprog         NA                                                                                                                                
## quantmod         NA                                                                                                                                
## quantreg         NA                                                                                                                                
## R6               NA                                                                                                                                
## rappdirs         NA                                                                                                                                
## rARPACK          NA                                                                                                                                
## raster           "Rcpp"                                                                                                                            
## rasterVis        NA                                                                                                                                
## RColorBrewer     NA                                                                                                                                
## Rcpp             NA                                                                                                                                
## RcppArmadillo    "Rcpp"                                                                                                                            
## RcppEigen        "Rcpp"                                                                                                                            
## RcppGSL          "Rcpp"                                                                                                                            
## RcppParallel     NA                                                                                                                                
## RcppZiggurat     "Rcpp, RcppGSL"                                                                                                                   
## readr            "cpp11, tzdb (>= 0.1.1)"                                                                                                          
## readxl           "cpp11 (>= 0.4.0), progress"                                                                                                      
## recipes          NA                                                                                                                                
## rematch          NA                                                                                                                                
## rematch2         NA                                                                                                                                
## remotes          NA                                                                                                                                
## reprex           NA                                                                                                                                
## reshape          NA                                                                                                                                
## reshape2         "Rcpp"                                                                                                                            
## rex              NA                                                                                                                                
## Rfast            "Rcpp (>= 0.12.3), RcppArmadillo"                                                                                                 
## rgdal            "sp"                                                                                                                              
## rlang            NA                                                                                                                                
## rmarkdown        NA                                                                                                                                
## Rmpfr            NA                                                                                                                                
## rngtools         NA                                                                                                                                
## robustbase       NA                                                                                                                                
## ROCR             NA                                                                                                                                
## rpart            NA                                                                                                                                
## rprojroot        NA                                                                                                                                
## rsconnect        NA                                                                                                                                
## RSpectra         "Rcpp, RcppEigen (>= 0.3.3.3.0)"                                                                                                  
## rstan            "Rcpp (>= 0.12.0), RcppEigen (>= 0.3.3.3.0), BH (>=\n1.72.0-2), StanHeaders (>= 2.21.0), RcppParallel"                            
## rstantools       NA                                                                                                                                
## rstatix          NA                                                                                                                                
## rstudioapi       NA                                                                                                                                
## Rttf2pt1         NA                                                                                                                                
## rvest            NA                                                                                                                                
## s2               "Rcpp, wk"                                                                                                                        
## sandwich         NA                                                                                                                                
## sass             NA                                                                                                                                
## scales           NA                                                                                                                                
## selectr          NA                                                                                                                                
## sf               "Rcpp"                                                                                                                            
## shape            NA                                                                                                                                
## SimComp          NA                                                                                                                                
## sm               NA                                                                                                                                
## sp               NA                                                                                                                                
## SparseM          NA                                                                                                                                
## spatial          NA                                                                                                                                
## spelling         NA                                                                                                                                
## splines          NA                                                                                                                                
## SQUAREM          NA                                                                                                                                
## stabledist       NA                                                                                                                                
## StanHeaders      "RcppEigen, RcppParallel (>= 5.0.1)"                                                                                              
## stats            NA                                                                                                                                
## stats4           NA                                                                                                                                
## statsExpressions NA                                                                                                                                
## stringi          NA                                                                                                                                
## stringr          NA                                                                                                                                
## strucchange      NA                                                                                                                                
## SuppDists        NA                                                                                                                                
## survival         NA                                                                                                                                
## survPresmooth    NA                                                                                                                                
## svglite          "cpp11, systemfonts"                                                                                                              
## sys              NA                                                                                                                                
## systemfonts      "cpp11 (>= 0.2.1)"                                                                                                                
## tcltk            NA                                                                                                                                
## terra            "Rcpp"                                                                                                                            
## testthat         NA                                                                                                                                
## TH.data          NA                                                                                                                                
## tibble           NA                                                                                                                                
## tidyr            "cpp11 (>= 0.4.0)"                                                                                                                
## tidyselect       NA                                                                                                                                
## tidyverse        NA                                                                                                                                
## timeDate         NA                                                                                                                                
## timeSeries       NA                                                                                                                                
## tinytex          NA                                                                                                                                
## TMB              "Matrix, RcppEigen"                                                                                                               
## tools            NA                                                                                                                                
## tram             NA                                                                                                                                
## tseries          NA                                                                                                                                
## TTR              "xts"                                                                                                                             
## tzdb             "cpp11 (>= 0.4.2)"                                                                                                                
## units            "Rcpp (>= 0.12.10)"                                                                                                               
## unmarked         "Rcpp, RcppArmadillo, TMB, RcppEigen"                                                                                             
## urca             NA                                                                                                                                
## utf8             NA                                                                                                                                
## utils            NA                                                                                                                                
## uuid             NA                                                                                                                                
## variables        NA                                                                                                                                
## vars             NA                                                                                                                                
## vctrs            NA                                                                                                                                
## vdiffr           "cpp11"                                                                                                                           
## vegan            NA                                                                                                                                
## VGAM             NA                                                                                                                                
## vioplot          NA                                                                                                                                
## viridis          NA                                                                                                                                
## viridisLite      NA                                                                                                                                
## vroom            "cpp11 (>= 0.2.0), progress (>= 1.2.1), tzdb (>= 0.1.1)"                                                                          
## waldo            NA                                                                                                                                
## withr            NA                                                                                                                                
## wk               NA                                                                                                                                
## WRS2             NA                                                                                                                                
## xfun             NA                                                                                                                                
## xml2             NA                                                                                                                                
## xmlparsedata     NA                                                                                                                                
## xtable           NA                                                                                                                                
## xts              "zoo"                                                                                                                             
## yaml             NA                                                                                                                                
## zeallot          NA                                                                                                                                
## zoo              NA                                                                                                                                
##                  Suggests                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## abind            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## afex             "emmeans (>= 1.4), coin, xtable, parallel, plyr, optimx,\nnloptr, knitr, rmarkdown, R.rsp, lattice, latticeExtra,\nmultcomp, testthat, mlmRev, dplyr, tidyr, dfoptim, Matrix,\npsychTools, ggplot2, MEMSS, effects, carData, ggbeeswarm, nlme,\ncowplot, jtools, ggpubr, ggpol, MASS, glmmTMB, brms, rstanarm,\nstatmod, performance (>= 0.7.2), see (>= 0.6.4), ez,\nggResidpanel"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## AICcmodavg       "betareg, coxme, fitdistrplus, glmmTMB, lavaan, lme4, maxlike,\nnnet, ordinal, pscl, R2jags, R2OpenBUGS, R2WinBUGS, jagsUI,\nlmerTest"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## alabama          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## askpass          "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## assertthat       "testthat, covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## backports        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## base             "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## base64enc        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## basefun          "coneproj"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## BayesFactor      "doMC, foreach, testthat, knitr, markdown, arm, lme4, xtable,\nlanguageR"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## bayestestR       "BayesFactor, bayesQR, bayesplot, BH, blavaan, bridgesampling,\nbrms, effectsize, emmeans, gamm4, ggdist, ggplot2, glmmTMB,\nhttr, KernSmooth, knitr, lavaan, lme4, logspline, MASS, mclust,\nmediation, modelbased, parameters, patchwork, performance,\nquadprog, posterior, RcppEigen, rmarkdown, rstan, rstanarm,\nsee, testthat, tweedie"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## BB               "setRNG, survival, Hmisc, numDeriv"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## bbmle            "emdbook, rms, ggplot2, RUnit, MuMIn, AICcmodavg, Hmisc,\noptimx (>= 2013.8.6), knitr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## bdsmatrix        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## BH               NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## bit              "testthat (>= 0.11.0), roxygen2, knitr, rmarkdown,\nmicrobenchmark, bit64 (>= 4.0.0), ff (>= 4.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## bit64            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## bitops           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## blob             "covr, crayon, pillar (>= 1.2.1), testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## boot             "MASS, survival"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## bridgesampling   "testthat, Rcpp, RcppEigen, R2jags, rjags, runjags, knitr,\nrmarkdown, R.rsp, BayesFactor, rstan, rstanarm, nimble,\nMCMCpack"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## brio             "covr, testthat (>= 2.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## Brobdingnag      "cubature, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## broom            "AER, AUC, bbmle, betareg, biglm, binGroup, boot, btergm (>=\n1.10.6), car, carData, caret, cluster, cmprsk, coda, covr, drc,\ne1071, emmeans, epiR, ergm (>= 3.10.4), fixest (>= 0.9.0), gam\n(>= 1.15), gee, geepack, glmnet, glmnetUtils, gmm, Hmisc,\nirlba, interp, joineRML, Kendall, knitr, ks, Lahman, lavaan,\nleaps, lfe, lm.beta, lme4, lmodel2, lmtest (>= 0.9.38),\nlsmeans, maps, maptools, margins, MASS, mclust, mediation,\nmetafor, mfx, mgcv, mlogit, modeldata, modeltests, muhaz,\nmultcomp, network, nnet, orcutt (>= 2.2), ordinal, plm, poLCA,\npsych, quantreg, rgeos, rmarkdown, robust, robustbase, rsample,\nsandwich, sp, spdep (>= 1.1), spatialreg, speedglm, spelling,\nsurvey, survival, systemfit, testthat (>= 2.1.0), tseries,\nvars, zoo"                                                                                                                                                                                                                         
## bslib            "shiny (>= 1.6.0), rmarkdown (>= 2.7), thematic, knitr,\ntestthat, withr, rappdirs, curl, magrittr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## BWStest          "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## cachem           "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## callr            "cli (>= 1.1.0), covr, mockery, ps, rprojroot, spelling,\ntestthat (>= 3.0.0), withr (>= 2.3.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## car              "alr4, boot, coxme, effects, knitr, leaps, lmtest, Matrix,\nMatrixModels, mvtnorm, rgl (>= 0.93.960), rio, sandwich,\nSparseM, survival, survey"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## carData          "car (>= 3.0-0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## cartogram        "rgeos, sp, rgdal, maptools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## caTools          "MASS, rpart"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## cellranger       "covr, testthat (>= 1.0.0), knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## changepoint      "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## checkmate        "R6, fastmatch, data.table (>= 1.9.8), devtools, ggplot2,\nknitr, magrittr, microbenchmark, rmarkdown, testthat (>=\n3.0.4), tinytest (>= 1.1.0), tibble"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## class            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## classInt         "spData (>= 0.2.6.2), units, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## cli              "callr, covr, digest, glue (>= 1.6.0), grDevices, htmltools,\nhtmlwidgets, knitr, methods, mockery, processx, ps (>=\n1.3.4.9000), rlang (>= 1.0.2.9003), rmarkdown, rprojroot,\nrstudioapi, testthat, tibble, whoami, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## clipr            "covr, knitr, rmarkdown, rstudioapi (>= 0.5), testthat (>=\n2.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## cluster          "MASS, Matrix"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## coda             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## codetools        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## coin             "xtable, e1071, vcd, TH.data (>= 1.0-7)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## colorspace       "datasets, utils, KernSmooth, MASS, kernlab, mvtnorm, vcd,\ntcltk, shiny, shinyjs, ggplot2, dplyr, scales, grid, png, jpeg,\nknitr, rmarkdown, RColorBrewer, rcartocolor, scico, viridis,\nwesanderson"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## commonmark       "curl, testthat, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## compiler         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## coneproj         "stats, graphics, grDevices, utils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## contfrac         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## correlation      "BayesFactor, poorman, energy, ggplot2, ggraph, gt, Hmisc,\nknitr, lme4, mbend, polycor, ppcor, psych, rmarkdown, rmcorr,\nrstanarm, see, testthat (>= 3.1.0), tidygraph, wdm, WRS2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## corrplot         "seriation, knitr, RColorBrewer, rmarkdown, magrittr,\nprettydoc, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## covr             "R6, curl, knitr, rmarkdown, htmltools, DT (>= 0.2), testthat,\nrlang, rstudioapi (>= 0.2), xml2 (>= 1.0.0), parallel, memoise,\nmockery, covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## cowplot          "Cairo, covr, dplyr, forcats, gridGraphics (>= 0.4-0), knitr,\nlattice, magick, maps, PASWR, patchwork, rmarkdown, ragg,\ntestthat (>= 1.0.0), tidyr, vdiffr (>= 0.3.0), VennDiagram"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## coxme            "mvtnorm, kinship2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## cpp11            "bench, brio, callr, cli, covr, decor, desc, ggplot2, glue,\nknitr, lobstr, mockery, progress, rmarkdown, scales, Rcpp,\ntestthat, tibble, utils, vctrs, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## crayon           "mockery, rstudioapi, testthat, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## curl             "spelling, testthat (>= 1.0.0), knitr, jsonlite, rmarkdown,\nmagrittr, httpuv (>= 1.4.4), webutils"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## cyclocomp        "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## data.table       "bit64 (>= 4.0.0), bit (>= 4.0.4), curl, R.utils, xts,\nnanotime, zoo (>= 1.8-1), yaml, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## datasets         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## datawizard       "bayestestR, boot, brms, data.table, dplyr (>= 1.0),\neffectsize, gamm4, ggplot2, haven, htmltools, httr, knitr,\nlme4, mediation, parameters, poorman (>= 0.2.6), psych, readxl,\nreadr, rio, rmarkdown, rstanarm, see, testthat (>= 3.1.0),\ntidyr, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## DBI              "blob, covr, DBItest, dbplyr, downlit, dplyr, glue, hms,\nknitr, magrittr, RMariaDB, rmarkdown, rprojroot, RSQLite (>=\n1.1-2), testthat, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## dbplyr           "bit64, covr, knitr, Lahman, nycflights13, odbc, RMariaDB (>=\n1.0.2), rmarkdown, RPostgres (>= 1.1.3), RPostgreSQL, RSQLite\n(>= 2.1.0), testthat (>= 3.0.2), tidyr (>= 1.2.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## deldir           "polyclip"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## DEoptimR         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## desc             "callr, covr, gh, spelling, testthat, whoami, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## deSolve          "scatterplot3d, FME"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## dichromat        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## diffobj          "knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## digest           "tinytest, simplermarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## doParallel       "caret, mlbench, rpart, RUnit"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## doRNG            "doParallel, doMPI, doRedis, rbenchmark, devtools, knitr,\nbibtex, testthat, pkgmaker (>= 0.31)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## dplyr            "bench, broom, callr, covr, DBI, dbplyr (>= 1.4.3), ggplot2,\nknitr, Lahman, lobstr, microbenchmark, nycflights13, purrr,\nrmarkdown, RMySQL, RPostgreSQL, RSQLite, testthat (>= 3.1.1),\ntidyr, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## dreamerr         "knitr, rmarkdown, stats, graphics"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## dtplyr           "bench, covr, knitr, rmarkdown, testthat (>= 3.0.0), tidyr (>=\n1.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## e1071            "cluster, mlbench, nnet, randomForest, rpart, SparseM, xtable,\nMatrix, MASS, slam"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## effectsize       "correlation (>= 0.8.2), see (>= 0.7.3), afex, BayesFactor,\nboot, brms, car, emmeans, knitr, lavaan, lme4, lmerTest, MASS,\nmgcv, parsnip, rmarkdown, rms, rstanarm, rstantools, testthat\n(>= 3.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## ellipsis         "covr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## elliptic         "emulator, calibrator (>= 1.2-8)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## evaluate         "covr, ggplot2, lattice, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## extrafont        "fontcm"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## extrafontdb      NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## fansi            "unitizer, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## farver           "covr, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## fastGHQuad       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## fastICA          "MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## fastmap          "testthat (>= 2.1.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## fBasics          "interp, RUnit, tcltk"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## feather          "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## fGarch           "RUnit, tcltk"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## fixest           "knitr, rmarkdown, data.table, plm, MASS, pander, ggplot2,\nlfe, tinytex, pdftools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## forcats          "covr, dplyr, ggplot2, knitr, readr, rmarkdown, testthat (>=\n3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## foreach          "randomForest, doMC, doParallel, testthat, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## forecast         "forecTheta, knitr, methods, rmarkdown, rticles, seasonal,\ntestthat, uroot"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## foreign          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## Formula          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## fracdiff         "longmemo, forecast, urca"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## fs               "testthat, covr, pillar (>= 1.0.0), tibble (>= 1.1.0), crayon,\nrmarkdown, knitr, withr, spelling, vctrs (>= 0.3.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## future           "methods, RhpcBLASctl, R.rsp, markdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## future.apply     "datasets, stats, tools, listenv (>= 0.8.0), R.rsp, markdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## gapminder        "dplyr, ggplot2, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## gargle           "aws.ec2metadata, aws.signature, covr, httpuv, knitr, mockr,\nrmarkdown, sodium, spelling, testthat (>= 3.1.2)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## gcookbook        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## gdtools          "htmltools, testthat, fontquiver (>= 0.2.0), curl"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## generics         "covr, pkgload, testthat (>= 3.0.0), tibble, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## ggcorrplot       "testthat (>= 3.0.0), knitr, spelling, vdiffr (>= 1.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## ggfortify        "testthat, cluster, changepoint, dlm, fGarch, forecast,\nggrepel, glmnet, grDevices, KFAS, knitr, lintr, mapdata,\nmarkdown, MASS, MSwM, nlme, raster, ROCR, sp, stats,\nstrucchange, survival, timeSeries, tseries, utils, vars, xts,\nzoo, lfda"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## ggplot2          "covr, dplyr, ggplot2movies, hexbin, Hmisc, knitr, lattice,\nmapproj, maps, maptools, multcomp, munsell, nlme, profvis,\nquantreg, ragg, RColorBrewer, rgeos, rmarkdown, rpart, sf (>=\n0.7-3), svglite (>= 1.2.0.9001), testthat (>= 3.1.2), vdiffr\n(>= 1.0.0), xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## ggplot2movies    NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## ggpubr           "grDevices, knitr, RColorBrewer, gtable, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## ggrepel          "knitr, rmarkdown, testthat, gridExtra, devtools, prettydoc,\nggbeeswarm, dplyr, magrittr, readr, stringr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## ggridges         "covr, dplyr, patchwork, ggplot2movies, forcats, knitr,\nrmarkdown, testthat, vdiffr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## ggsci            "knitr, rmarkdown, gridExtra, reshape2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## ggside           "tidyr, dplyr, testthat (>= 3.0.3), knitr, rmarkdown, vdiffr\n(>= 1.0.0), ggdendro, viridis"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## ggsignif         "knitr, rmarkdown, testthat, vdiffr (>= 1.0.2)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## ggstatsplot      "afex, BayesFactor (>= 0.9.12-4.4), gapminder, ggcorrplot,\nggside, knitr, lme4, MASS, metaBMA, metafor, metaplus,\nPMCMRplus, psych, rmarkdown, spelling, survival, testthat (>=\n3.1.4), tibble, vdiffr, WRS2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## glmnet           "knitr, lars, testthat, xfun, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## globals          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## glue             "covr, crayon, DBI, dplyr, forcats, ggplot2, knitr, magrittr,\nmicrobenchmark, R.utils, rmarkdown, rprintf, RSQLite, stringr,\ntestthat (>= 3.0.0), vctrs (>= 0.3.0), waldo (>= 0.3.0), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## gmp              "Rmpfr, MASS, round"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## googledrive      "covr, curl, downlit, dplyr (>= 1.0.0), knitr, mockr,\nrmarkdown, roxygen2, sodium, spelling, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## googlesheets4    "covr, readr, rmarkdown, sodium, spelling, testthat (>=\n3.1.3), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## gower            "tinytest (>= 0.9.3),"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## gplots           "grid, MASS, knitr, r2d2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## graphics         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## grDevices        "KernSmooth"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## grid             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## gridExtra        "ggplot2, egg, lattice, knitr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## gss              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## gtable           "covr, testthat, knitr, rmarkdown, ggplot2, profvis"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## gtools           "car, gplots, knitr, rstudioapi, SGP, taxize"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## hardhat          "covr, crayon, devtools, knitr, Matrix, modeldata (>= 0.0.2),\nrecipes (>= 0.1.8), rmarkdown (>= 2.3), roxygen2, testthat (>=\n3.0.0), usethis (>= 2.1.5)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## haven            "covr, crayon, fs, knitr, pillar (>= 1.4.0), rmarkdown,\ntestthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## hexbin           "marray, affy, Biobase, limma, knitr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## highr            "knitr, markdown, testit"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## hms              "crayon, lubridate, pillar (>= 1.1.0), testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## hrbrthemes       "testthat, dplyr, gridExtra, hunspell, stringi, gcookbook,\nclipr, vdiffr, svglite"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## htmltools        "markdown, testthat, withr, Cairo, ragg, shiny"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## httr             "covr, httpuv, jpeg, knitr, png, readr, rmarkdown, testthat\n(>= 0.8.0), xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## hunspell         "spelling, testthat, pdftools, janeaustenr, wordcloud2, knitr,\nstopwords, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## hypergeo         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## ids              "knitr, rcorpora, rmarkdown, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## inline           "Rcpp (>= 0.11.0), tinytest"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## insight          "AER, afex, aod, BayesFactor, bayestestR, bbmle, bdsmatrix,\nbetareg, bife, biglm, blavaan, blme, boot, brms, censReg, cgam,\nclubSandwich, coxme, cplm, crch, datawizard, effectsize,\nemmeans, epiR, estimatr, feisr, fixest, fungible, gam, gamlss,\ngamm4, gbm, gee, geepack, GLMMadaptive, glmmTMB, gmnl, gt,\nhttr, ivreg, JM, knitr, lavaan, lavaSearch2, lfe, lme4,\nlmerTest, lmtest, logistf, logitr, MASS, marginaleffects,\nMatrix, mclogit, mclust, MCMCglmm, merTools, metaBMA, mgcv,\nmice, mlogit, mhurdle, multgee, nlme, nnet, nonnest2, ordinal,\npanelr, parameters, parsnip, pbkrtest, performance, plm,\npoorman, pscl, psych, quantreg, rmarkdown, rms, robustbase,\nrobustlmm, rstanarm (>= 2.21.1), rstantools, rstudioapi,\nsandwich, speedglm, splines, statmod, survey, survival,\ntestthat, truncreg, tweedie, VGAM"                                                                                                                                                      
## interp           "sp, Deriv, Ryacas, ggplot2, gridExtra, lattice, stringi,\nstringr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## ipred            "mvtnorm, mlbench, TH.data, randomForest, party"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## isoband          "covr, ggplot2, knitr, magick, microbenchmark, rmarkdown, sf,\ntestthat, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## ISwR             "survival,MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## iterators        "RUnit, foreach"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## jpeg             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## jquerylib        "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## jsonlite         "httr, curl, vctrs, testthat, knitr, rmarkdown, R.rsp, sf"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## KernSmooth       "MASS, carData"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## KFAS             "knitr, lme4, MASS, Matrix, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## knitr            "markdown, formatR, testit, digest, rgl (>= 0.95.1201),\ncodetools, rmarkdown, htmlwidgets (>= 0.7), webshot, tikzDevice\n(>= 0.10), tinytex, reticulate (>= 1.4), JuliaCall (>= 0.11.1),\nmagick, png, jpeg, gifski, xml2 (>= 1.2.0), httr, DBI (>=\n0.4-1), showtext, tibble, sass, bslib, ragg, gridSVG, styler\n(>= 1.2.0), targets (>= 0.6.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## kSamples         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## labeling         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## LaplacesDemon    "KernSmooth"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## lattice          "KernSmooth, MASS, latticeExtra"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## latticeExtra     "maps, mapproj, deldir, quantreg, zoo, mgcv"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## lava             "KernSmooth, Matrix, Rgraphviz, data.table, ellipse, fields,\ngeepack, gof (>= 0.9), graph, knitr, bookdown, rmarkdown,\nigraph (>= 0.6), lava.tobit (>= 0.4.7), lavaSearch2, lme4, mets\n(>= 1.1), nlme, optimx, polycor, quantreg, rgl, R.rsp (>=\n0.40), targeted (>= 0.2), testthat (>= 0.11), visNetwork, zoo"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## lazyeval         "knitr, rmarkdown (>= 0.2.65), testthat, covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## lfda             "testthat, rgl"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## libcoin          "coin"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## lifecycle        "covr, crayon, knitr, lintr, rmarkdown, testthat (>= 3.0.1),\ntibble, tidyverse, tools, vctrs, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## lintr            "covr, httr (>= 1.2.1), mockery, patrick, pkgdown, rmarkdown,\nrstudioapi (>= 0.2), testthat (>= 3.0.0), tibble, withr (>=\n2.5.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## listenv          "R.utils, R.rsp, markdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## lme4             "knitr, rmarkdown, MEMSS, testthat (>= 0.8.1), ggplot2,\nmlmRev, optimx (>= 2013.8.6), gamm4, pbkrtest, HSAUR3,\nnumDeriv, car, dfoptim, mgcv, statmod, rr2, semEff, tibble,\nmerDeriv"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## lmerTest         "pbkrtest (>= 0.4-3), tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## lmtest           "car, strucchange, sandwich, dynlm, stats4, survival, AER"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## logspline        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## loo              "bayesplot (>= 1.7.0), brms (>= 2.10.0), ggplot2, graphics,\nknitr, rmarkdown, rstan, rstanarm (>= 2.19.0), rstantools,\nspdep, testthat (>= 2.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## lubridate        "covr, knitr, testthat (>= 2.1.0), vctrs (>= 0.3.0), rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## magrittr         "covr, knitr, rlang, rmarkdown, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## mapdata          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## mapproj          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## maps             "mapproj (>= 1.2-0), mapdata (>= 2.3.0), sp, rnaturalearth"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## maptools         "rgeos (>= 0.1-8), spatstat.geom (>= 1.65-0), PBSmapping,\nmaps, RColorBrewer, raster, polyclip, plotrix, spatstat.linnet\n(>= 1.65-3), spatstat.utils (>= 1.19.0), spatstat (>= 2.0-0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## markdown         "knitr, RCurl"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## MASS             "lattice, nlme, nnet, survival"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## mathjaxr         "js"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## Matrix           "expm, MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## MatrixModels     NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## matrixStats      "base64enc, ggplot2, knitr, markdown, microbenchmark,\nR.devices, R.rsp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## mc2d             "fitdistrplus, survival, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## memoise          "digest, aws.s3, covr, googleAuthR, googleCloudStorageR, httr,\ntestthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## metaBMA          "testthat, knitr, rmarkdown, spelling"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## metadat          "metafor, numDeriv, BiasedUrn, dfoptim, igraph, ape, testthat,\ndigest, lme4, clubSandwich, meta, netmeta, mvtnorm, gridExtra,\nrms"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## metafor          "lme4, numDeriv, pracma, minqa, nloptr, dfoptim, ucminf,\nlbfgsb3c, subplex, BB, Rsolnp, alabama, optimParallel,\nCompQuadForm, mvtnorm, BiasedUrn, Epi, survival, GLMMadaptive,\nglmmTMB, multcomp, gsl, sp, ape, boot, clubSandwich, crayon,\nR.rsp, testthat, rmarkdown, wildmeta"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## metaplus         "R.rsp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## methods          "codetools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## mgcv             "parallel, survival, MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## mime             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## minqa            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## mlt              "MASS, nnet, TH.data, multcomp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## mnormt           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## modelr           "compiler, covr, ggplot2, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## modeltools       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## mratios          "nlme"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## MSwM             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## multcomp         "lme4 (>= 0.999375-16), nlme, robustbase, coin, MASS, foreign,\nxtable, lmtest, coxme (>= 2.2-1), SimComp, ISwR, tram (>=\n0.2-5), fixest (>= 0.10)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## multcompView     "multcomp, pgirmess, MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## munsell          "ggplot2, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## mvtnorm          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## nlme             "Hmisc, MASS, SASmixed"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## nloptr           "knitr, rmarkdown, xml2, testthat (>= 3.0.0), covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## nnet             "MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## numDeriv         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## openssl          "curl, testthat (>= 2.1.0), digest, knitr, rmarkdown,\njsonlite, jose, sodium"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## orthopolynom     NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## packcircles      "ggiraph, ggplot2, knitr, rmarkdown, lpSolve"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## packrat          "testthat (>= 3.0.0), devtools, httr, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## paletteer        "covr, ggplot2 (>= 3.3.0), ggthemes (>= 4.0.0), harrypotter\n(>= 2.1.0), knitr, oompaBase, palr, pals, rmarkdown, scico,\ntestthat (>= 2.1.0), vdiffr, viridisLite"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## palmerpenguins   "knitr, rmarkdown, tibble, ggplot2, dplyr, tidyr, recipes"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## parallel         "methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## parallelly       NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## parameters       "AER, afex, aod, BayesFactor, BayesFM, bbmle, betareg, biglm,\nblme, boot, brglm2, brms, broom, cAIC4, car, cgam,\nClassDiscovery, clubSandwich, cluster, cplm, dbscan, domir (>=\n0.2.0), drc, DRR, effectsize (>= 0.6.0), EGAnet (>= 0.7),\nemmeans (>= 1.7.0), factoextra, FactoMineR, fastICA, fixest,\nfpc, gam, gamlss, gee, geepack, ggplot2, GLMMadaptive, glmmTMB,\nGPArotation, gt, haven, httr, Hmisc, ivprobit, ivreg, knitr,\nlavaan, lavaSearch2, lfe, lm.beta, lme4, lmerTest, lmtest,\nlogspline, lqmm, M3C, magrittr, marginaleffects, MASS, Matrix,\nmclust, MCMCglmm, mediation, merDeriv, metaBMA, metafor, mfx,\nmgcv, mice, multcomp, MuMIn, NbClust, nFactors, nlme, nnet,\nopenxlsx, ordinal, panelr, pbkrtest, PCDimension, performance\n(>= 0.10.0), plm, PMCMRplus, poorman, posterior, PROreg, pscl,\npsych, pvclust, quantreg, randomForest, rmarkdown, rms,\nrstanarm, rsvd, sandwich, see (>= 0.6.9), sparsepca, survey,\nsurvival, testthat, TMB, truncreg, VGAM, WRS2"
## patchwork        "knitr, rmarkdown, gridGraphics, gridExtra, ragg, testthat (>=\n2.1.0), vdiffr, covr, png"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## pbapply          "shiny"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## pbkrtest         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## performance      "AER, afex, BayesFactor, bayesplot, betareg, bigutilsr,\nblavaan, brms, car, CompQuadForm, correlation, cplm, dbscan,\nestimatr, fixest, forecast, gamm4, ggplot2, glmmTMB, httr, ICS,\nICSOutlier, ISLR, lavaan, lme4, lmtest, loo, magrittr, MASS,\nMatrix, mclust, metafor, mgcv, mlogit, multimode, nlme,\nnonnest2, ordinal, parallel, parameters, patchwork, poorman,\npscl, psych, randomForest, rmarkdown, rstanarm, rstantools,\nsandwich, see, survey, survival, testthat, tweedie, VGAM"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## permute          "vegan (>= 2.0-0), testthat (>= 0.5), parallel, knitr,\nrmarkdown, bookdown, sessioninfo"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## pillar           "bit64, debugme, DiagrammeR, dplyr, formattable, ggplot2,\nknitr, lubridate, nanotime, nycflights13, palmerpenguins,\nrmarkdown, scales, stringi, survival, testthat (>= 3.1.1),\ntibble, units (>= 0.7.2), vdiffr, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## pkgbuild         "Rcpp, cpp11, testthat, covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## pkgconfig        "covr, testthat, disposables (>= 1.0.3)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## pkgload          "bitops, covr, mathjaxr, pak, pkgbuild, Rcpp, remotes,\nrstudioapi, testthat (>= 3.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## plyr             "abind, covr, doParallel, foreach, iterators, itertools,\ntcltk, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## PMCMRplus        "xtable, graphics, knitr, rmarkdown, car, e1071, multcomp,\npwr, NSM3"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## png              NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## polynom          "knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## praise           "testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## prettyunits      "codetools, covr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## prismatic        "covr, crayon, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## processx         "callr (>= 3.7.0), cli (>= 3.3.0), codetools, covr, curl,\ndebugme, parallel, rlang (>= 1.0.2), testthat (>= 3.0.0), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## prodlim          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## progress         "Rcpp, testthat, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## progressr        "graphics, tcltk, beepr, crayon, pbmcapply, progress, purrr,\nforeach, plyr, doFuture, future, future.apply, furrr,\nrstudioapi, shiny, commonmark, base64enc, tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## proxy            "cba"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## ps               "callr, covr, curl, pillar, pingr, processx (>= 3.1.0), R6,\nrlang, testthat (>= 3.0.0),"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## psych            "psychTools, GPArotation, lavaan, lme4, Rcsdp, graph, knitr,\nRgraphviz"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## purrr            "covr, crayon, dplyr (>= 0.7.8), httr, knitr, rmarkdown,\ntestthat, tibble, tidyselect, vctrs"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## quadprog         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## quantmod         "DBI,RMySQL,RSQLite,timeSeries,xml2,downloader,jsonlite(>=\n1.1)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## quantreg         "tripack, interp, rgl, logspline, nor1mix, Formula, zoo,\nR.rsp, conquer"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## R6               "testthat, pryr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rappdirs         "roxygen2, testthat (>= 3.0.0), covr, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## rARPACK          "Matrix (>= 1.1-0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## raster           "ncdf4, igraph, tcltk, parallel, rasterVis, MASS, sf,\ntinytest, gstat, fields, exactextractr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## rasterVis        "rgl, ggplot2, colorspace, dichromat, sf"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## RColorBrewer     NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## Rcpp             "tinytest, inline, rbenchmark, pkgKitten (>= 0.1.2)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## RcppArmadillo    "tinytest, Matrix (>= 1.3.0), pkgKitten, reticulate, slam"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## RcppEigen        "inline, tinytest, pkgKitten, microbenchmark"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## RcppGSL          "tinytest"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## RcppParallel     "Rcpp, RUnit, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## RcppZiggurat     "rbenchmark, microbenchmark, lattice, knitr, rmarkdown, pinp"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## readr            "covr, curl, datasets, knitr, rmarkdown, spelling, stringi,\ntestthat (>= 3.1.2), tzdb (>= 0.1.1), waldo, withr, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## readxl           "knitr, rmarkdown, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## recipes          "covr, ddalpha, dials (>= 1.0.0), ggplot2, igraph, kernlab,\nknitr, modeldata (>= 0.1.1), parsnip (>= 0.1.7), RANN,\nRcppRoll, rmarkdown, rpart, rsample, RSpectra, splines2,\ntestthat (>= 3.0.0), workflows, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## rematch          "covr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## rematch2         "covr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## remotes          "brew, callr, codetools, curl, covr, git2r (>= 0.23.0), knitr,\nmockery, pkgbuild (>= 1.0.1), pingr, rmarkdown, rprojroot,\ntestthat, webfakes, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## reprex           "covr, fortunes, miniUI, mockr, rprojroot, sessioninfo, shiny,\nspelling, styler (>= 1.2.0), testthat (>= 3.0.2)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## reshape          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## reshape2         "covr, lattice, testthat (>= 0.8.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## rex              "covr, dplyr, ggplot2, Hmisc, knitr, magrittr, rmarkdown,\nroxygen2, rvest, stringr, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## Rfast            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## rgdal            "knitr, DBI, RSQLite, maptools, mapview, rmarkdown, curl,\nrgeos"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## rlang            "cli (>= 3.1.0), covr, crayon, fs, glue, knitr, magrittr,\nmethods, pillar, rmarkdown, stats, testthat (>= 3.0.0), tibble,\nusethis, vctrs (>= 0.2.3), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## rmarkdown        "digest, dygraphs, fs, rsconnect, downlit (>= 0.4.0), katex\n(>= 1.4.0), sass (>= 0.4.0), shiny (>= 1.6.0), testthat (>=\n3.0.3), tibble, tufte, vctrs, withr (>= 2.4.2)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## Rmpfr            "MASS, Bessel, polynom, sfsmisc (>= 1.0-20), Matrix"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## rngtools         "covr, RUnit, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## robustbase       "grid, MASS, lattice, boot, cluster, Matrix, robust,\nfit.models, MPV, xtable, ggplot2, GGally, RColorBrewer,\nreshape2, sfsmisc, catdata, doParallel, foreach, skewt"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## ROCR             "testthat, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## rpart            "survival"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## rprojroot        "covr, knitr, lifecycle, mockr, rmarkdown, testthat (>=\n3.0.0), withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## rsconnect        "MASS, RCurl, callr, httpuv, knitr, plumber (>= 0.3.2),\nreticulate, rmarkdown (>= 1.1), shiny, sourcetools, testthat,\nxtable"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## RSpectra         "knitr, rmarkdown, prettydoc"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## rstan            "RUnit, RcppEigen (>= 0.3.3.3.0), BH (>= 1.72.0-2), parallel,\nKernSmooth, shinystan (>= 2.3.0), bayesplot (>= 1.5.0),\nrmarkdown, rstantools, rstudioapi, Matrix, knitr (>= 1.15.1),\nV8"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## rstantools       "rstan (>= 2.17.2), usethis (>= 1.5.1), testthat (>= 2.0.0),\nknitr, pkgbuild, pkgload, roxygen2 (>= 6.0.1), rmarkdown,\nrstudioapi"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## rstatix          "knitr, rmarkdown, ggpubr, graphics, emmeans, coin, boot,\ntestthat, spelling"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## rstudioapi       "testthat, knitr, rmarkdown, clipr, covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## Rttf2pt1         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## rvest            "covr, knitr, readr, repurrrsive, rmarkdown, spelling, stringi\n(>= 0.3.1), testthat (>= 3.0.2), webfakes"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## s2               "testthat (>= 3.0.0), vctrs"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## sandwich         "AER, car, geepack, lattice, lme4, lmtest, MASS, multiwayvcov,\nparallel, pcse, plm, pscl, scatterplot3d, stats4, strucchange,\nsurvival"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## sass             "testthat, knitr, rmarkdown, withr, shiny, curl"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## scales           "bit64, covr, dichromat, ggplot2, hms (>= 0.5.0), stringi,\ntestthat (>= 3.0.0), waldo (>= 0.4.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## selectr          "testthat, XML, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## sf               "blob, covr, dplyr (>= 0.8-3), ggplot2, knitr, lwgeom (>=\n0.2-1), maps, mapview, Matrix, microbenchmark, odbc, pbapply,\npillar, pool, raster, rlang, rmarkdown, RPostgres (>= 1.1.0),\nRPostgreSQL, RSQLite, sp (>= 1.2-4), spatstat (>= 2.0-1),\nspatstat.geom, spatstat.random, spatstat.linnet,\nspatstat.utils, stars (>= 0.2-0), terra, testthat, tibble (>=\n1.4.1), tidyr (>= 1.2.0), tidyselect (>= 1.0.0), tmap (>= 2.0),\nvctrs, wk"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## shape            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## SimComp          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## sm               "rgl, misc3d, interp, gam, tkrplot, rpanel (>= 1.1-4), tcltk"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## sp               "RColorBrewer, rgdal (>= 1.2-3), rgeos (>= 0.3-13), gstat,\nmaptools, deldir, knitr, rmarkdown, sf"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## SparseM          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## spatial          "MASS"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## spelling         "pdftools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## splines          "Matrix, methods"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## SQUAREM          "setRNG"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## stabledist       "Matrix, fBasics, FMStable, RUnit, Rmpfr, sfsmisc"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## StanHeaders      "Rcpp, BH, knitr (>= 1.15.1), rmarkdown, Matrix, methods,\nrstan"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## stats            "MASS, Matrix, SuppDists, methods, stats4"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## stats4           NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## statsExpressions "afex, ggplot2, knitr, metaBMA, metafor, metaplus, PMCMRplus,\npurrr, rmarkdown, spelling, survival, testthat (>= 3.1.4),\nutils, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## stringi          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## stringr          "covr, htmltools, htmlwidgets, knitr, rmarkdown, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## strucchange      "stats4, car, dynlm, e1071, foreach, lmtest, mvtnorm, tseries"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## SuppDists        "RcppZiggurat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## survival         NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## survPresmooth    NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## svglite          "htmltools, testthat, xml2 (>= 1.0.0), covr, fontquiver (>=\n0.2.0), knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## sys              "unix (>= 1.4), spelling, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## systemfonts      "testthat (>= 2.1.0), covr, knitr, rmarkdown, tools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## tcltk            NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## terra            "parallel, tinytest, ncdf4, sf (>= 0.9-8), deldir, XML,\nleaflet"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## testthat         "covr, curl (>= 0.9.5), diffviewer (>= 0.1.0), knitr, mockery,\nrmarkdown, rstudioapi, shiny, usethis, vctrs (>= 0.1.0), xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## TH.data          "dplyr, gdata, plyr, trtf, tram, rms, coin, ATR, multcomp,\ngridExtra, vcd, colorspace, lattice, knitr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## tibble           "bench, bit64, blob, brio, callr, cli, covr, crayon (>=\n1.3.4), DiagrammeR, dplyr, evaluate, formattable, ggplot2, hms,\nhtmltools, knitr, lubridate, mockr, nycflights13, pkgbuild,\npkgload, purrr, rmarkdown, stringi, testthat (>= 3.0.2), tidyr,\nwithr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## tidyr            "covr, data.table, jsonlite, knitr, readr, repurrrsive (>=\n1.0.0), rmarkdown, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## tidyselect       "covr, crayon, dplyr, knitr, magrittr, rmarkdown, stringr,\ntestthat (>= 3.1.1), tibble (>= 2.1.3)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## tidyverse        "covr, feather, glue, knitr, rmarkdown, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## timeDate         "date, RUnit"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## timeSeries       "RUnit, robustbase, xts, PerformanceAnalytics, fTrading"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## tinytex          "testit, rstudioapi"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## TMB              "numDeriv, parallel"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## tools            "codetools, methods, xml2, curl, commonmark, knitr, xfun, mathjaxr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## tram             "MASS, TH.data, trtf (>= 0.3-3), mlbench, knitr, quantreg,\ncolorspace, ATR, lme4, merDeriv, SparseGrid, alabama, numDeriv,\ngridExtra, lattice, latticeExtra, HSAUR3, ordinalCont, coxme,\nmlt.docreg, ordinal, coin, asht, gamlss"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## tseries          NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## TTR              "RUnit"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## tzdb             "covr, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## units            "NISTunits, measurements, xml2, magrittr, pillar (>= 1.3.0),\ndplyr (>= 1.0.0), vctrs (>= 0.3.1), ggplot2 (> 3.2.1), testthat\n(>= 3.0.0), vdiffr, knitr, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## unmarked         "knitr, rmarkdown, pkgdown, raster, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## urca             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## utf8             "cli, covr, knitr, rlang, rmarkdown, testthat (>= 3.0.0),\nwithr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## utils            "methods, xml2, commonmark, knitr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## uuid             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## variables        NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## vars             NA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## vctrs            "bit64, covr, crayon, dplyr (>= 0.8.5), generics, knitr,\npillar (>= 1.4.4), pkgdown (>= 2.0.1), rmarkdown, testthat (>=\n3.0.0), tibble (>= 3.1.3), withr, xml2, waldo (>= 0.2.0),\nzeallot"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## vdiffr           "covr, ggplot2 (>= 3.2.0), roxygen2, withr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## vegan            "parallel, tcltk, knitr, markdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## VGAM             "VGAMextra, MASS, mgcv"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## vioplot          "base, ggplot2, RColorBrewer, knitr, rmarkdown, testthat"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## viridis          "hexbin (>= 1.27.0), scales, MASS, knitr, dichromat,\ncolorspace, raster, rasterVis, httr, mapproj, vdiffr, svglite\n(>= 1.2.0), testthat, covr, rmarkdown, rgdal, maps"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## viridisLite      "hexbin (>= 1.27.0), ggplot2 (>= 1.0.1), testthat, covr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## vroom            "archive, bench (>= 1.1.0), covr, curl, dplyr, forcats, fs,\nggplot2, knitr, patchwork, prettyunits, purrr, rmarkdown,\nrstudioapi, scales, spelling, testthat (>= 2.1.0), tidyr,\nutils, waldo, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## waldo            "covr, R6, testthat (>= 3.0.0), withr, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## withr            "callr, covr, DBI, knitr, lattice, methods, rlang, rmarkdown\n(>= 2.12), RSQLite, testthat (>= 3.0.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## wk               "testthat (>= 3.0.0), vctrs (>= 0.3.0), sf, tibble, readr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## WRS2             "knitr, car, ggplot2, colorspace, mediation, GGally, codetools"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## xfun             "testit, parallel, codetools, rstudioapi, tinytex (>= 0.30),\nmime, markdown, knitr, htmltools, remotes, pak, rhub, renv,\ncurl, jsonlite, magick, rmarkdown"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## xml2             "covr, curl, httr, knitr, magrittr, mockery, rmarkdown,\ntestthat (>= 2.1.0)"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## xmlparsedata     "covr, testthat, xml2"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## xtable           "knitr, plm, zoo, survival"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## xts              "timeSeries, timeDate, tseries, chron, tis, RUnit"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## yaml             "RUnit"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## zeallot          "testthat, knitr, rmarkdown, purrr, magrittr"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## zoo              "AER, coda, chron, ggplot2 (>= 3.0.0), mondate, scales,\nstinepack, strucchange, timeDate, timeSeries, tis, tseries, xts"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##                  Enhances                                                             
## abind            NA                                                                   
## afex             NA                                                                   
## AICcmodavg       NA                                                                   
## alabama          NA                                                                   
## askpass          NA                                                                   
## assertthat       NA                                                                   
## backports        NA                                                                   
## base             NA                                                                   
## base64enc        "png"                                                                
## basefun          NA                                                                   
## BayesFactor      NA                                                                   
## bayestestR       NA                                                                   
## BB               NA                                                                   
## bbmle            NA                                                                   
## bdsmatrix        NA                                                                   
## BH               NA                                                                   
## bit              NA                                                                   
## bit64            NA                                                                   
## bitops           NA                                                                   
## blob             NA                                                                   
## boot             NA                                                                   
## bridgesampling   NA                                                                   
## brio             NA                                                                   
## Brobdingnag      NA                                                                   
## broom            NA                                                                   
## bslib            NA                                                                   
## BWStest          NA                                                                   
## cachem           NA                                                                   
## callr            NA                                                                   
## car              NA                                                                   
## carData          NA                                                                   
## cartogram        NA                                                                   
## caTools          NA                                                                   
## cellranger       NA                                                                   
## changepoint      NA                                                                   
## checkmate        NA                                                                   
## class            NA                                                                   
## classInt         NA                                                                   
## cli              NA                                                                   
## clipr            NA                                                                   
## cluster          NA                                                                   
## coda             NA                                                                   
## codetools        NA                                                                   
## coin             NA                                                                   
## colorspace       NA                                                                   
## commonmark       NA                                                                   
## compiler         NA                                                                   
## coneproj         NA                                                                   
## contfrac         NA                                                                   
## correlation      NA                                                                   
## corrplot         NA                                                                   
## covr             NA                                                                   
## cowplot          NA                                                                   
## coxme            NA                                                                   
## cpp11            NA                                                                   
## crayon           NA                                                                   
## curl             NA                                                                   
## cyclocomp        NA                                                                   
## data.table       NA                                                                   
## datasets         NA                                                                   
## datawizard       NA                                                                   
## DBI              NA                                                                   
## dbplyr           NA                                                                   
## deldir           NA                                                                   
## DEoptimR         "robustbase"                                                         
## desc             NA                                                                   
## deSolve          NA                                                                   
## dichromat        NA                                                                   
## diffobj          NA                                                                   
## digest           NA                                                                   
## doParallel       "compiler"                                                           
## doRNG            NA                                                                   
## dplyr            NA                                                                   
## dreamerr         NA                                                                   
## dtplyr           NA                                                                   
## e1071            NA                                                                   
## effectsize       NA                                                                   
## ellipsis         NA                                                                   
## elliptic         NA                                                                   
## evaluate         NA                                                                   
## extrafont        NA                                                                   
## extrafontdb      NA                                                                   
## fansi            NA                                                                   
## farver           NA                                                                   
## fastGHQuad       NA                                                                   
## fastICA          NA                                                                   
## fastmap          NA                                                                   
## fBasics          NA                                                                   
## feather          NA                                                                   
## fGarch           NA                                                                   
## fixest           NA                                                                   
## forcats          NA                                                                   
## foreach          NA                                                                   
## forecast         NA                                                                   
## foreign          NA                                                                   
## Formula          NA                                                                   
## fracdiff         NA                                                                   
## fs               NA                                                                   
## future           NA                                                                   
## future.apply     NA                                                                   
## gapminder        NA                                                                   
## gargle           NA                                                                   
## gcookbook        NA                                                                   
## gdtools          NA                                                                   
## generics         NA                                                                   
## ggcorrplot       NA                                                                   
## ggfortify        NA                                                                   
## ggplot2          "sp"                                                                 
## ggplot2movies    NA                                                                   
## ggpubr           NA                                                                   
## ggrepel          NA                                                                   
## ggridges         NA                                                                   
## ggsci            NA                                                                   
## ggside           NA                                                                   
## ggsignif         NA                                                                   
## ggstatsplot      NA                                                                   
## glmnet           NA                                                                   
## globals          NA                                                                   
## glue             NA                                                                   
## gmp              NA                                                                   
## googledrive      NA                                                                   
## googlesheets4    NA                                                                   
## gower            NA                                                                   
## gplots           NA                                                                   
## graphics         NA                                                                   
## grDevices        NA                                                                   
## grid             NA                                                                   
## gridExtra        NA                                                                   
## gss              NA                                                                   
## gtable           NA                                                                   
## gtools           NA                                                                   
## hardhat          NA                                                                   
## haven            NA                                                                   
## hexbin           NA                                                                   
## highr            NA                                                                   
## hms              NA                                                                   
## hrbrthemes       NA                                                                   
## htmltools        "knitr"                                                              
## httr             NA                                                                   
## hunspell         NA                                                                   
## hypergeo         NA                                                                   
## ids              NA                                                                   
## inline           NA                                                                   
## insight          NA                                                                   
## interp           "RcppEigen"                                                          
## ipred            NA                                                                   
## isoband          NA                                                                   
## ISwR             NA                                                                   
## iterators        NA                                                                   
## jpeg             NA                                                                   
## jquerylib        NA                                                                   
## jsonlite         NA                                                                   
## KernSmooth       NA                                                                   
## KFAS             NA                                                                   
## knitr            NA                                                                   
## kSamples         NA                                                                   
## labeling         NA                                                                   
## LaplacesDemon    NA                                                                   
## lattice          "chron"                                                              
## latticeExtra     NA                                                                   
## lava             NA                                                                   
## lazyeval         NA                                                                   
## lfda             NA                                                                   
## libcoin          NA                                                                   
## lifecycle        NA                                                                   
## lintr            NA                                                                   
## listenv          NA                                                                   
## lme4             NA                                                                   
## lmerTest         NA                                                                   
## lmtest           NA                                                                   
## logspline        NA                                                                   
## loo              NA                                                                   
## lubridate        "chron, timeDate, tis, zoo"                                          
## magrittr         NA                                                                   
## mapdata          NA                                                                   
## mapproj          NA                                                                   
## maps             NA                                                                   
## maptools         "gpclib"                                                             
## markdown         NA                                                                   
## MASS             NA                                                                   
## mathjaxr         NA                                                                   
## Matrix           "MatrixModels, graph, SparseM, sfsmisc, igraph, maptools, sp,\nspdep"
## MatrixModels     NA                                                                   
## matrixStats      NA                                                                   
## mc2d             NA                                                                   
## memoise          NA                                                                   
## metaBMA          NA                                                                   
## metadat          NA                                                                   
## metafor          NA                                                                   
## metaplus         NA                                                                   
## methods          NA                                                                   
## mgcv             NA                                                                   
## mime             NA                                                                   
## minqa            NA                                                                   
## mlt              NA                                                                   
## mnormt           NA                                                                   
## modelr           NA                                                                   
## modeltools       NA                                                                   
## mratios          NA                                                                   
## MSwM             NA                                                                   
## multcomp         NA                                                                   
## multcompView     NA                                                                   
## munsell          NA                                                                   
## mvtnorm          NA                                                                   
## nlme             NA                                                                   
## nloptr           NA                                                                   
## nnet             NA                                                                   
## numDeriv         NA                                                                   
## openssl          NA                                                                   
## orthopolynom     NA                                                                   
## packcircles      NA                                                                   
## packrat          NA                                                                   
## paletteer        NA                                                                   
## palmerpenguins   NA                                                                   
## parallel         "snow, nws, Rmpi"                                                    
## parallelly       NA                                                                   
## parameters       NA                                                                   
## patchwork        NA                                                                   
## pbapply          NA                                                                   
## pbkrtest         NA                                                                   
## performance      NA                                                                   
## permute          NA                                                                   
## pillar           NA                                                                   
## pkgbuild         NA                                                                   
## pkgconfig        NA                                                                   
## pkgload          NA                                                                   
## plyr             NA                                                                   
## PMCMRplus        NA                                                                   
## png              NA                                                                   
## polynom          NA                                                                   
## praise           NA                                                                   
## prettyunits      NA                                                                   
## prismatic        NA                                                                   
## processx         NA                                                                   
## prodlim          NA                                                                   
## progress         NA                                                                   
## progressr        NA                                                                   
## proxy            NA                                                                   
## ps               NA                                                                   
## psych            NA                                                                   
## purrr            NA                                                                   
## quadprog         NA                                                                   
## quantmod         NA                                                                   
## quantreg         NA                                                                   
## R6               NA                                                                   
## rappdirs         NA                                                                   
## rARPACK          NA                                                                   
## raster           NA                                                                   
## rasterVis        NA                                                                   
## RColorBrewer     NA                                                                   
## Rcpp             NA                                                                   
## RcppArmadillo    NA                                                                   
## RcppEigen        NA                                                                   
## RcppGSL          NA                                                                   
## RcppParallel     NA                                                                   
## RcppZiggurat     NA                                                                   
## readr            NA                                                                   
## readxl           NA                                                                   
## recipes          NA                                                                   
## rematch          NA                                                                   
## rematch2         NA                                                                   
## remotes          NA                                                                   
## reprex           NA                                                                   
## reshape          NA                                                                   
## reshape2         NA                                                                   
## rex              NA                                                                   
## Rfast            NA                                                                   
## rgdal            NA                                                                   
## rlang            "winch"                                                              
## rmarkdown        NA                                                                   
## Rmpfr            "dfoptim, pracma"                                                    
## rngtools         NA                                                                   
## robustbase       "robustX, rrcov, matrixStats, quantreg, Hmisc"                       
## ROCR             NA                                                                   
## rpart            NA                                                                   
## rprojroot        NA                                                                   
## rsconnect        NA                                                                   
## RSpectra         NA                                                                   
## rstan            NA                                                                   
## rstantools       NA                                                                   
## rstatix          NA                                                                   
## rstudioapi       NA                                                                   
## Rttf2pt1         NA                                                                   
## rvest            NA                                                                   
## s2               NA                                                                   
## sandwich         NA                                                                   
## sass             NA                                                                   
## scales           NA                                                                   
## selectr          NA                                                                   
## sf               NA                                                                   
## shape            NA                                                                   
## SimComp          NA                                                                   
## sm               NA                                                                   
## sp               NA                                                                   
## SparseM          NA                                                                   
## spatial          NA                                                                   
## spelling         NA                                                                   
## splines          NA                                                                   
## SQUAREM          NA                                                                   
## stabledist       NA                                                                   
## StanHeaders      NA                                                                   
## stats            NA                                                                   
## stats4           NA                                                                   
## statsExpressions NA                                                                   
## stringi          NA                                                                   
## stringr          NA                                                                   
## strucchange      NA                                                                   
## SuppDists        NA                                                                   
## survival         NA                                                                   
## survPresmooth    NA                                                                   
## svglite          NA                                                                   
## sys              NA                                                                   
## systemfonts      NA                                                                   
## tcltk            NA                                                                   
## terra            NA                                                                   
## testthat         NA                                                                   
## TH.data          NA                                                                   
## tibble           NA                                                                   
## tidyr            NA                                                                   
## tidyselect       NA                                                                   
## tidyverse        NA                                                                   
## timeDate         NA                                                                   
## timeSeries       NA                                                                   
## tinytex          NA                                                                   
## TMB              NA                                                                   
## tools            NA                                                                   
## tram             NA                                                                   
## tseries          NA                                                                   
## TTR              "quantmod"                                                           
## tzdb             NA                                                                   
## units            NA                                                                   
## unmarked         NA                                                                   
## urca             NA                                                                   
## utf8             NA                                                                   
## utils            NA                                                                   
## uuid             NA                                                                   
## variables        NA                                                                   
## vars             NA                                                                   
## vctrs            NA                                                                   
## vdiffr           NA                                                                   
## vegan            NA                                                                   
## VGAM             "VGAMdata"                                                           
## vioplot          NA                                                                   
## viridis          NA                                                                   
## viridisLite      NA                                                                   
## vroom            NA                                                                   
## waldo            NA                                                                   
## withr            NA                                                                   
## wk               NA                                                                   
## WRS2             NA                                                                   
## xfun             NA                                                                   
## xml2             NA                                                                   
## xmlparsedata     NA                                                                   
## xtable           NA                                                                   
## xts              NA                                                                   
## yaml             NA                                                                   
## zeallot          NA                                                                   
## zoo              NA                                                                   
##                  License                                  License_is_FOSS
## abind            "LGPL (>= 2)"                            NA             
## afex             "GPL (>= 2)"                             NA             
## AICcmodavg       "GPL (>= 2)"                             NA             
## alabama          "GPL (>= 2)"                             NA             
## askpass          "MIT + file LICENSE"                     NA             
## assertthat       "GPL-3"                                  NA             
## backports        "GPL-2 | GPL-3"                          NA             
## base             "Part of R 4.2.1"                        NA             
## base64enc        "GPL-2 | GPL-3"                          NA             
## basefun          "GPL-2"                                  NA             
## BayesFactor      "GPL-2"                                  NA             
## bayestestR       "GPL-3"                                  NA             
## BB               "GPL-3"                                  NA             
## bbmle            "GPL"                                    NA             
## bdsmatrix        "LGPL-2"                                 NA             
## BH               "BSL-1.0"                                NA             
## bit              "GPL-2 | GPL-3"                          NA             
## bit64            "GPL-2 | GPL-3"                          NA             
## bitops           "GPL (>= 2)"                             NA             
## blob             "MIT + file LICENSE"                     NA             
## boot             "Unlimited"                              NA             
## bridgesampling   "GPL (>= 2)"                             NA             
## brio             "MIT + file LICENSE"                     NA             
## Brobdingnag      "GPL"                                    NA             
## broom            "MIT + file LICENSE"                     NA             
## bslib            "MIT + file LICENSE"                     NA             
## BWStest          "LGPL-3"                                 NA             
## cachem           "MIT + file LICENSE"                     NA             
## callr            "MIT + file LICENSE"                     NA             
## car              "GPL (>= 2)"                             NA             
## carData          "GPL (>= 2)"                             NA             
## cartogram        "GPL-3"                                  NA             
## caTools          "GPL-3"                                  NA             
## cellranger       "MIT + file LICENSE"                     NA             
## changepoint      "GPL"                                    NA             
## checkmate        "BSD_3_clause + file LICENSE"            NA             
## class            "GPL-2 | GPL-3"                          NA             
## classInt         "GPL (>= 2)"                             NA             
## cli              "MIT + file LICENSE"                     NA             
## clipr            "GPL-3"                                  NA             
## cluster          "GPL (>= 2)"                             NA             
## coda             "GPL (>= 2)"                             NA             
## codetools        "GPL"                                    NA             
## coin             "GPL-2"                                  NA             
## colorspace       "BSD_3_clause + file LICENSE"            NA             
## commonmark       "BSD_2_clause + file LICENSE"            NA             
## compiler         "Part of R 4.2.1"                        NA             
## coneproj         "GPL (>= 2)"                             NA             
## contfrac         "GPL-2"                                  NA             
## correlation      "GPL-3"                                  NA             
## corrplot         "MIT + file LICENSE"                     NA             
## covr             "MIT + file LICENSE"                     NA             
## cowplot          "GPL-2"                                  NA             
## coxme            "LGPL-2"                                 NA             
## cpp11            "MIT + file LICENSE"                     NA             
## crayon           "MIT + file LICENSE"                     NA             
## curl             "MIT + file LICENSE"                     NA             
## cyclocomp        "MIT + file LICENSE"                     NA             
## data.table       "MPL-2.0 | file LICENSE"                 NA             
## datasets         "Part of R 4.2.1"                        NA             
## datawizard       "GPL (>= 3)"                             NA             
## DBI              "LGPL (>= 2.1)"                          NA             
## dbplyr           "MIT + file LICENSE"                     NA             
## deldir           "GPL (>= 2)"                             NA             
## DEoptimR         "GPL (>= 2)"                             NA             
## desc             "MIT + file LICENSE"                     NA             
## deSolve          "GPL (>= 2)"                             NA             
## dichromat        "GPL-2"                                  NA             
## diffobj          "GPL-2 | GPL-3"                          NA             
## digest           "GPL (>= 2)"                             NA             
## doParallel       "GPL-2"                                  NA             
## doRNG            "GPL (>= 2)"                             NA             
## dplyr            "MIT + file LICENSE"                     NA             
## dreamerr         "GPL-3"                                  NA             
## dtplyr           "MIT + file LICENSE"                     NA             
## e1071            "GPL-2 | GPL-3"                          NA             
## effectsize       "GPL-3"                                  NA             
## ellipsis         "MIT + file LICENSE"                     NA             
## elliptic         "GPL-2"                                  NA             
## evaluate         "MIT + file LICENSE"                     NA             
## extrafont        "GPL-2"                                  NA             
## extrafontdb      "GPL-2"                                  NA             
## fansi            "GPL-2 | GPL-3"                          NA             
## farver           "MIT + file LICENSE"                     NA             
## fastGHQuad       "MIT + file LICENSE"                     NA             
## fastICA          "GPL-2 | GPL-3"                          NA             
## fastmap          "MIT + file LICENSE"                     NA             
## fBasics          "GPL (>= 2)"                             NA             
## feather          "Apache License 2.0"                     NA             
## fGarch           "GPL (>= 2)"                             NA             
## fixest           "GPL-3"                                  NA             
## forcats          "MIT + file LICENSE"                     NA             
## foreach          "Apache License (== 2.0)"                NA             
## forecast         "GPL-3"                                  NA             
## foreign          "GPL (>= 2)"                             NA             
## Formula          "GPL-2 | GPL-3"                          NA             
## fracdiff         "GPL (>= 2)"                             NA             
## fs               "MIT + file LICENSE"                     NA             
## future           "LGPL (>= 2.1)"                          NA             
## future.apply     "GPL (>= 2)"                             NA             
## gapminder        "CC0"                                    NA             
## gargle           "MIT + file LICENSE"                     NA             
## gcookbook        "GPL-2"                                  NA             
## gdtools          "GPL-3 | file LICENSE"                   NA             
## generics         "MIT + file LICENSE"                     NA             
## ggcorrplot       "GPL-2"                                  NA             
## ggfortify        "MIT + file LICENSE"                     NA             
## ggplot2          "MIT + file LICENSE"                     NA             
## ggplot2movies    "GPL-3"                                  NA             
## ggpubr           "GPL-2"                                  NA             
## ggrepel          "GPL-3 | file LICENSE"                   NA             
## ggridges         "GPL-2 | file LICENSE"                   NA             
## ggsci            "GPL-3 | file LICENSE"                   NA             
## ggside           "MIT + file LICENSE"                     NA             
## ggsignif         "GPL-3 | file LICENSE"                   NA             
## ggstatsplot      "GPL-3 | file LICENSE"                   NA             
## glmnet           "GPL-2"                                  NA             
## globals          "LGPL (>= 2.1)"                          NA             
## glue             "MIT + file LICENSE"                     NA             
## gmp              "GPL (>= 2)"                             NA             
## googledrive      "MIT + file LICENSE"                     NA             
## googlesheets4    "MIT + file LICENSE"                     NA             
## gower            "GPL-3"                                  NA             
## gplots           "GPL-2"                                  NA             
## graphics         "Part of R 4.2.1"                        NA             
## grDevices        "Part of R 4.2.1"                        NA             
## grid             "Part of R 4.2.1"                        NA             
## gridExtra        "GPL (>= 2)"                             NA             
## gss              "GPL (>= 2)"                             NA             
## gtable           "MIT + file LICENSE"                     NA             
## gtools           "GPL-2"                                  NA             
## hardhat          "MIT + file LICENSE"                     NA             
## haven            "MIT + file LICENSE"                     NA             
## hexbin           "GPL-2"                                  NA             
## highr            "GPL"                                    NA             
## hms              "MIT + file LICENSE"                     NA             
## hrbrthemes       "MIT + file LICENSE"                     NA             
## htmltools        "GPL (>= 2)"                             NA             
## httr             "MIT + file LICENSE"                     NA             
## hunspell         "GPL-2 | LGPL-2.1 | MPL-1.1"             NA             
## hypergeo         "GPL-2"                                  NA             
## ids              "MIT + file LICENSE"                     NA             
## inline           "LGPL"                                   NA             
## insight          "GPL-3"                                  NA             
## interp           "GPL (>= 2)"                             NA             
## ipred            "GPL (>= 2)"                             NA             
## isoband          "MIT + file LICENSE"                     NA             
## ISwR             "GPL (>= 2)"                             NA             
## iterators        "Apache License (== 2.0)"                NA             
## jpeg             "GPL-2 | GPL-3"                          NA             
## jquerylib        "MIT + file LICENSE"                     NA             
## jsonlite         "MIT + file LICENSE"                     NA             
## KernSmooth       "Unlimited"                              NA             
## KFAS             "GPL (>= 2)"                             NA             
## knitr            "GPL"                                    NA             
## kSamples         "GPL (>= 2)"                             NA             
## labeling         "MIT + file LICENSE | Unlimited"         NA             
## LaplacesDemon    "MIT + file LICENSE"                     NA             
## lattice          "GPL (>= 2)"                             NA             
## latticeExtra     "GPL (>= 2)"                             NA             
## lava             "GPL-3"                                  NA             
## lazyeval         "GPL-3"                                  NA             
## lfda             "MIT + file LICENSE"                     NA             
## libcoin          "GPL-2"                                  NA             
## lifecycle        "MIT + file LICENSE"                     NA             
## lintr            "MIT + file LICENSE"                     NA             
## listenv          "LGPL (>= 2.1)"                          NA             
## lme4             "GPL (>= 2)"                             NA             
## lmerTest         "GPL (>= 2)"                             NA             
## lmtest           "GPL-2 | GPL-3"                          NA             
## logspline        "Apache License 2.0"                     NA             
## loo              "GPL (>= 3)"                             NA             
## lubridate        "GPL (>= 2)"                             NA             
## magrittr         "MIT + file LICENSE"                     NA             
## mapdata          "GPL-2"                                  NA             
## mapproj          "Lucent Public License"                  NA             
## maps             "GPL-2"                                  NA             
## maptools         "GPL (>= 2)"                             NA             
## markdown         "GPL-2"                                  NA             
## MASS             "GPL-2 | GPL-3"                          NA             
## mathjaxr         "GPL-3"                                  NA             
## Matrix           "GPL (>= 2) | file LICENCE"              NA             
## MatrixModels     "GPL (>= 2)"                             NA             
## matrixStats      "Artistic-2.0"                           NA             
## mc2d             "GPL (>= 2)"                             NA             
## memoise          "MIT + file LICENSE"                     NA             
## metaBMA          "GPL-3"                                  NA             
## metadat          "GPL (>= 2)"                             NA             
## metafor          "GPL (>= 2)"                             NA             
## metaplus         "GPL (>= 2)"                             NA             
## methods          "Part of R 4.2.1"                        NA             
## mgcv             "GPL (>= 2)"                             NA             
## mime             "GPL"                                    NA             
## minqa            "GPL-2"                                  NA             
## mlt              "GPL-2"                                  NA             
## mnormt           "GPL-2 | GPL-3"                          NA             
## modelr           "GPL-3"                                  NA             
## modeltools       "GPL-2"                                  NA             
## mratios          "GPL-2"                                  NA             
## MSwM             "GPL (>= 2.0)"                           NA             
## multcomp         "GPL-2"                                  NA             
## multcompView     "GPL"                                    NA             
## munsell          "MIT + file LICENSE"                     NA             
## mvtnorm          "GPL-2"                                  NA             
## nlme             "GPL (>= 2)"                             NA             
## nloptr           "LGPL (>= 3)"                            NA             
## nnet             "GPL-2 | GPL-3"                          NA             
## numDeriv         "GPL-2"                                  NA             
## openssl          "MIT + file LICENSE"                     NA             
## orthopolynom     "GPL (>= 2)"                             NA             
## packcircles      "MIT + file LICENSE"                     NA             
## packrat          "GPL-2"                                  NA             
## paletteer        "GPL-3"                                  NA             
## palmerpenguins   "CC0"                                    NA             
## parallel         "Part of R 4.2.1"                        NA             
## parallelly       "LGPL (>= 2.1)"                          NA             
## parameters       "GPL-3"                                  NA             
## patchwork        "MIT + file LICENSE"                     NA             
## pbapply          "GPL-2"                                  NA             
## pbkrtest         "GPL (>= 2)"                             NA             
## performance      "GPL-3"                                  NA             
## permute          "GPL-2"                                  NA             
## pillar           "MIT + file LICENSE"                     NA             
## pkgbuild         "MIT + file LICENSE"                     NA             
## pkgconfig        "MIT + file LICENSE"                     NA             
## pkgload          "GPL-3"                                  NA             
## plyr             "MIT + file LICENSE"                     NA             
## PMCMRplus        "GPL (>= 3)"                             NA             
## png              "GPL-2 | GPL-3"                          NA             
## polynom          "GPL-2"                                  NA             
## praise           "MIT + file LICENSE"                     NA             
## prettyunits      "MIT + file LICENSE"                     NA             
## prismatic        "MIT + file LICENSE"                     NA             
## processx         "MIT + file LICENSE"                     NA             
## prodlim          "GPL (>= 2)"                             NA             
## progress         "MIT + file LICENSE"                     NA             
## progressr        "GPL (>= 3)"                             NA             
## proxy            "GPL-2"                                  NA             
## ps               "MIT + file LICENSE"                     NA             
## psych            "GPL (>= 2)"                             NA             
## purrr            "GPL-3 | file LICENSE"                   NA             
## quadprog         "GPL (>= 2)"                             NA             
## quantmod         "GPL-3"                                  NA             
## quantreg         "GPL (>= 2)"                             NA             
## R6               "MIT + file LICENSE"                     NA             
## rappdirs         "MIT + file LICENSE"                     NA             
## rARPACK          "BSD_3_clause + file LICENSE"            NA             
## raster           "GPL (>= 3)"                             NA             
## rasterVis        "GPL-3"                                  NA             
## RColorBrewer     "Apache License 2.0"                     NA             
## Rcpp             "GPL (>= 2)"                             NA             
## RcppArmadillo    "GPL (>= 2)"                             NA             
## RcppEigen        "GPL (>= 2) | file LICENSE"              NA             
## RcppGSL          "GPL (>= 2)"                             NA             
## RcppParallel     "GPL (>= 3)"                             NA             
## RcppZiggurat     "GPL (>= 2)"                             NA             
## readr            "MIT + file LICENSE"                     NA             
## readxl           "MIT + file LICENSE"                     NA             
## recipes          "MIT + file LICENSE"                     NA             
## rematch          "MIT + file LICENSE"                     NA             
## rematch2         "MIT + file LICENSE"                     NA             
## remotes          "MIT + file LICENSE"                     NA             
## reprex           "MIT + file LICENSE"                     NA             
## reshape          "MIT + file LICENSE"                     NA             
## reshape2         "MIT + file LICENSE"                     NA             
## rex              "MIT + file LICENSE"                     NA             
## Rfast            "GPL (>= 2.0)"                           NA             
## rgdal            "GPL (>= 2)"                             NA             
## rlang            "MIT + file LICENSE"                     NA             
## rmarkdown        "GPL-3"                                  NA             
## Rmpfr            "GPL (>= 2)"                             NA             
## rngtools         "GPL-3"                                  NA             
## robustbase       "GPL (>= 2)"                             NA             
## ROCR             "GPL (>= 2)"                             NA             
## rpart            "GPL-2 | GPL-3"                          NA             
## rprojroot        "MIT + file LICENSE"                     NA             
## rsconnect        "GPL-2"                                  NA             
## RSpectra         "MPL (>= 2)"                             NA             
## rstan            "GPL (>= 3)"                             NA             
## rstantools       "GPL (>= 3)"                             NA             
## rstatix          "GPL-2"                                  NA             
## rstudioapi       "MIT + file LICENSE"                     NA             
## Rttf2pt1         "file LICENSE"                           "yes"          
## rvest            "MIT + file LICENSE"                     NA             
## s2               "Apache License (== 2.0)"                NA             
## sandwich         "GPL-2 | GPL-3"                          NA             
## sass             "MIT + file LICENSE"                     NA             
## scales           "MIT + file LICENSE"                     NA             
## selectr          "BSD_3_clause + file LICENCE"            NA             
## sf               "GPL-2 | MIT + file LICENSE"             NA             
## shape            "GPL (>= 3)"                             NA             
## SimComp          "GPL"                                    NA             
## sm               "GPL (>= 2)"                             NA             
## sp               "GPL (>= 2)"                             NA             
## SparseM          "GPL (>= 2)"                             NA             
## spatial          "GPL-2 | GPL-3"                          NA             
## spelling         "MIT + file LICENSE"                     NA             
## splines          "Part of R 4.2.1"                        NA             
## SQUAREM          "GPL (>= 2)"                             NA             
## stabledist       "GPL (>= 2)"                             NA             
## StanHeaders      "BSD_3_clause + file LICENSE"            NA             
## stats            "Part of R 4.2.1"                        NA             
## stats4           "Part of R 4.2.1"                        NA             
## statsExpressions "GPL-3 | file LICENSE"                   NA             
## stringi          "file LICENSE"                           NA             
## stringr          "GPL-2 | file LICENSE"                   NA             
## strucchange      "GPL-2 | GPL-3"                          NA             
## SuppDists        "GPL (>= 2)"                             NA             
## survival         "LGPL (>= 2)"                            NA             
## survPresmooth    "GPL (>= 2)"                             NA             
## svglite          "GPL (>= 2)"                             NA             
## sys              "MIT + file LICENSE"                     NA             
## systemfonts      "MIT + file LICENSE"                     NA             
## tcltk            "Part of R 4.2.1"                        NA             
## terra            "GPL (>= 3)"                             NA             
## testthat         "MIT + file LICENSE"                     NA             
## TH.data          "GPL-3"                                  NA             
## tibble           "MIT + file LICENSE"                     NA             
## tidyr            "MIT + file LICENSE"                     NA             
## tidyselect       "MIT + file LICENSE"                     NA             
## tidyverse        "MIT + file LICENSE"                     NA             
## timeDate         "GPL (>= 2)"                             NA             
## timeSeries       "GPL (>= 2)"                             NA             
## tinytex          "MIT + file LICENSE"                     NA             
## TMB              "GPL-2"                                  NA             
## tools            "Part of R 4.2.1"                        NA             
## tram             "GPL-2"                                  NA             
## tseries          "GPL-2"                                  NA             
## TTR              "GPL (>= 2)"                             NA             
## tzdb             "MIT + file LICENSE"                     NA             
## units            "GPL-2"                                  NA             
## unmarked         "GPL (>= 3)"                             NA             
## urca             "GPL (>= 2)"                             NA             
## utf8             "Apache License (== 2.0) | file LICENSE" NA             
## utils            "Part of R 4.2.1"                        NA             
## uuid             "MIT + file LICENSE"                     NA             
## variables        "GPL-2"                                  NA             
## vars             "GPL (>= 2)"                             NA             
## vctrs            "MIT + file LICENSE"                     NA             
## vdiffr           "MIT + file LICENSE"                     NA             
## vegan            "GPL-2"                                  NA             
## VGAM             "GPL-3"                                  NA             
## vioplot          "BSD_3_clause + file LICENSE"            NA             
## viridis          "MIT + file LICENSE"                     NA             
## viridisLite      "MIT + file LICENSE"                     NA             
## vroom            "MIT + file LICENSE"                     NA             
## waldo            "MIT + file LICENSE"                     NA             
## withr            "MIT + file LICENSE"                     NA             
## wk               "MIT + file LICENSE"                     NA             
## WRS2             "GPL-3"                                  NA             
## xfun             "MIT + file LICENSE"                     NA             
## xml2             "MIT + file LICENSE"                     NA             
## xmlparsedata     "MIT + file LICENSE"                     NA             
## xtable           "GPL (>= 2)"                             NA             
## xts              "GPL (>= 2)"                             NA             
## yaml             "BSD_3_clause + file LICENSE"            NA             
## zeallot          "MIT + file LICENSE"                     NA             
## zoo              "GPL-2 | GPL-3"                          NA             
##                  License_restricts_use OS_type MD5sum NeedsCompilation Built  
## abind            NA                    NA      NA     "no"             "4.2.0"
## afex             NA                    NA      NA     "no"             "4.2.0"
## AICcmodavg       NA                    NA      NA     "no"             "4.2.0"
## alabama          NA                    NA      NA     "no"             "4.2.0"
## askpass          NA                    NA      NA     "yes"            "4.2.0"
## assertthat       NA                    NA      NA     "no"             "4.2.0"
## backports        NA                    NA      NA     "yes"            "4.2.0"
## base             NA                    NA      NA     NA               "4.2.1"
## base64enc        NA                    NA      NA     "yes"            "4.2.0"
## basefun          NA                    NA      NA     "yes"            "4.2.0"
## BayesFactor      NA                    NA      NA     "yes"            "4.2.0"
## bayestestR       NA                    NA      NA     "no"             "4.2.0"
## BB               NA                    NA      NA     "no"             "4.2.0"
## bbmle            NA                    NA      NA     "no"             "4.2.0"
## bdsmatrix        NA                    NA      NA     "yes"            "4.2.0"
## BH               NA                    NA      NA     "no"             "4.2.0"
## bit              NA                    NA      NA     "yes"            "4.2.0"
## bit64            NA                    NA      NA     "yes"            "4.2.0"
## bitops           NA                    NA      NA     "yes"            "4.2.0"
## blob             NA                    NA      NA     "no"             "4.2.0"
## boot             NA                    NA      NA     "no"             "4.2.1"
## bridgesampling   NA                    NA      NA     "no"             "4.2.0"
## brio             NA                    NA      NA     "yes"            "4.2.0"
## Brobdingnag      NA                    NA      NA     "no"             "4.2.0"
## broom            NA                    NA      NA     "no"             "4.2.0"
## bslib            NA                    NA      NA     "no"             "4.2.0"
## BWStest          NA                    NA      NA     "yes"            "4.2.0"
## cachem           NA                    NA      NA     "yes"            "4.2.0"
## callr            NA                    NA      NA     "no"             "4.2.0"
## car              NA                    NA      NA     "no"             "4.2.0"
## carData          NA                    NA      NA     "no"             "4.2.0"
## cartogram        NA                    NA      NA     "no"             "4.2.0"
## caTools          NA                    NA      NA     "yes"            "4.2.0"
## cellranger       NA                    NA      NA     "no"             "4.2.0"
## changepoint      NA                    NA      NA     "yes"            "4.2.0"
## checkmate        NA                    NA      NA     "yes"            "4.2.0"
## class            NA                    NA      NA     "yes"            "4.2.1"
## classInt         NA                    NA      NA     "yes"            "4.2.0"
## cli              NA                    NA      NA     "yes"            "4.2.0"
## clipr            NA                    NA      NA     "no"             "4.2.0"
## cluster          NA                    NA      NA     "yes"            "4.2.1"
## coda             NA                    NA      NA     "no"             "4.2.0"
## codetools        NA                    NA      NA     "no"             "4.2.1"
## coin             NA                    NA      NA     "yes"            "4.2.0"
## colorspace       NA                    NA      NA     "yes"            "4.2.0"
## commonmark       NA                    NA      NA     "yes"            "4.2.0"
## compiler         NA                    NA      NA     NA               "4.2.1"
## coneproj         NA                    NA      NA     "yes"            "4.2.0"
## contfrac         NA                    NA      NA     "yes"            "4.2.0"
## correlation      NA                    NA      NA     "no"             "4.2.0"
## corrplot         NA                    NA      NA     "no"             "4.2.0"
## covr             NA                    NA      NA     "yes"            "4.2.0"
## cowplot          NA                    NA      NA     "no"             "4.2.0"
## coxme            NA                    NA      NA     "yes"            "4.2.0"
## cpp11            NA                    NA      NA     "no"             "4.2.0"
## crayon           NA                    NA      NA     "no"             "4.2.0"
## curl             NA                    NA      NA     "yes"            "4.2.0"
## cyclocomp        NA                    NA      NA     "no"             "4.2.0"
## data.table       NA                    NA      NA     "yes"            "4.2.0"
## datasets         NA                    NA      NA     NA               "4.2.1"
## datawizard       NA                    NA      NA     "no"             "4.2.0"
## DBI              NA                    NA      NA     "no"             "4.2.0"
## dbplyr           NA                    NA      NA     "no"             "4.2.0"
## deldir           NA                    NA      NA     "yes"            "4.2.0"
## DEoptimR         NA                    NA      NA     "no"             "4.2.0"
## desc             NA                    NA      NA     "no"             "4.2.0"
## deSolve          NA                    NA      NA     "yes"            "4.2.0"
## dichromat        NA                    NA      NA     "no"             "4.2.0"
## diffobj          NA                    NA      NA     "yes"            "4.2.0"
## digest           NA                    NA      NA     "yes"            "4.2.0"
## doParallel       NA                    NA      NA     "no"             "4.2.0"
## doRNG            NA                    NA      NA     "no"             "4.2.0"
## dplyr            NA                    NA      NA     "yes"            "4.2.0"
## dreamerr         NA                    NA      NA     "no"             "4.2.0"
## dtplyr           NA                    NA      NA     "no"             "4.2.0"
## e1071            NA                    NA      NA     "yes"            "4.2.0"
## effectsize       NA                    NA      NA     "no"             "4.2.0"
## ellipsis         NA                    NA      NA     "yes"            "4.2.0"
## elliptic         NA                    NA      NA     "no"             "4.2.0"
## evaluate         NA                    NA      NA     "no"             "4.2.0"
## extrafont        NA                    NA      NA     "no"             "4.2.0"
## extrafontdb      NA                    NA      NA     NA               "4.2.0"
## fansi            NA                    NA      NA     "yes"            "4.2.0"
## farver           NA                    NA      NA     "yes"            "4.2.0"
## fastGHQuad       NA                    NA      NA     "yes"            "4.2.0"
## fastICA          NA                    NA      NA     "yes"            "4.2.0"
## fastmap          NA                    NA      NA     "yes"            "4.2.0"
## fBasics          NA                    NA      NA     "yes"            "4.2.0"
## feather          NA                    NA      NA     "yes"            "4.2.0"
## fGarch           NA                    NA      NA     "yes"            "4.2.0"
## fixest           NA                    NA      NA     "yes"            "4.2.0"
## forcats          NA                    NA      NA     "no"             "4.2.0"
## foreach          NA                    NA      NA     "no"             "4.2.0"
## forecast         NA                    NA      NA     "yes"            "4.2.0"
## foreign          NA                    NA      NA     "yes"            "4.2.1"
## Formula          NA                    NA      NA     "no"             "4.2.0"
## fracdiff         NA                    NA      NA     "yes"            "4.2.0"
## fs               NA                    NA      NA     "yes"            "4.2.0"
## future           NA                    NA      NA     "no"             "4.2.0"
## future.apply     NA                    NA      NA     "no"             "4.2.0"
## gapminder        NA                    NA      NA     "no"             "4.2.0"
## gargle           NA                    NA      NA     "no"             "4.2.0"
## gcookbook        NA                    NA      NA     "no"             "4.2.0"
## gdtools          NA                    NA      NA     "yes"            "4.2.0"
## generics         NA                    NA      NA     "no"             "4.2.0"
## ggcorrplot       NA                    NA      NA     "no"             "4.2.0"
## ggfortify        NA                    NA      NA     "no"             "4.2.0"
## ggplot2          NA                    NA      NA     "no"             "4.2.0"
## ggplot2movies    NA                    NA      NA     "no"             "4.2.0"
## ggpubr           NA                    NA      NA     "no"             "4.2.0"
## ggrepel          NA                    NA      NA     "yes"            "4.2.0"
## ggridges         NA                    NA      NA     "no"             "4.2.0"
## ggsci            NA                    NA      NA     "no"             "4.2.0"
## ggside           NA                    NA      NA     "no"             "4.2.0"
## ggsignif         NA                    NA      NA     "no"             "4.2.0"
## ggstatsplot      NA                    NA      NA     "no"             "4.2.0"
## glmnet           NA                    NA      NA     "yes"            "4.2.0"
## globals          NA                    NA      NA     "no"             "4.2.0"
## glue             NA                    NA      NA     "yes"            "4.2.0"
## gmp              NA                    NA      NA     "yes"            "4.2.0"
## googledrive      NA                    NA      NA     "no"             "4.2.0"
## googlesheets4    NA                    NA      NA     "no"             "4.2.0"
## gower            NA                    NA      NA     "yes"            "4.2.0"
## gplots           NA                    NA      NA     "no"             "4.2.0"
## graphics         NA                    NA      NA     "yes"            "4.2.1"
## grDevices        NA                    NA      NA     "yes"            "4.2.1"
## grid             NA                    NA      NA     "yes"            "4.2.1"
## gridExtra        NA                    NA      NA     "no"             "4.2.0"
## gss              NA                    NA      NA     "yes"            "4.2.0"
## gtable           NA                    NA      NA     "no"             "4.2.0"
## gtools           NA                    NA      NA     "yes"            "4.2.0"
## hardhat          NA                    NA      NA     "no"             "4.2.0"
## haven            NA                    NA      NA     "yes"            "4.2.0"
## hexbin           NA                    NA      NA     "yes"            "4.2.0"
## highr            NA                    NA      NA     "no"             "4.2.0"
## hms              NA                    NA      NA     "no"             "4.2.0"
## hrbrthemes       NA                    NA      NA     "no"             "4.2.0"
## htmltools        NA                    NA      NA     "yes"            "4.2.0"
## httr             NA                    NA      NA     "no"             "4.2.0"
## hunspell         NA                    NA      NA     "yes"            "4.2.0"
## hypergeo         NA                    NA      NA     "no"             "4.2.0"
## ids              NA                    NA      NA     "no"             "4.2.0"
## inline           NA                    NA      NA     "no"             "4.2.0"
## insight          NA                    NA      NA     "no"             "4.2.0"
## interp           NA                    NA      NA     "yes"            "4.2.0"
## ipred            NA                    NA      NA     "yes"            "4.2.0"
## isoband          NA                    NA      NA     "yes"            "4.2.0"
## ISwR             NA                    NA      NA     "no"             "4.2.0"
## iterators        NA                    NA      NA     "no"             "4.2.0"
## jpeg             NA                    NA      NA     "yes"            "4.2.0"
## jquerylib        NA                    NA      NA     "no"             "4.2.0"
## jsonlite         NA                    NA      NA     "yes"            "4.2.0"
## KernSmooth       NA                    NA      NA     "yes"            "4.2.1"
## KFAS             NA                    NA      NA     "yes"            "4.2.0"
## knitr            NA                    NA      NA     "no"             "4.2.0"
## kSamples         NA                    NA      NA     "yes"            "4.2.0"
## labeling         NA                    NA      NA     "no"             "4.2.0"
## LaplacesDemon    NA                    NA      NA     "no"             "4.2.0"
## lattice          NA                    NA      NA     "yes"            "4.2.1"
## latticeExtra     NA                    NA      NA     "no"             "4.2.0"
## lava             NA                    NA      NA     "no"             "4.2.0"
## lazyeval         NA                    NA      NA     "yes"            "4.2.0"
## lfda             NA                    NA      NA     "no"             "4.2.0"
## libcoin          NA                    NA      NA     "yes"            "4.2.0"
## lifecycle        NA                    NA      NA     "no"             "4.2.0"
## lintr            NA                    NA      NA     "no"             "4.2.0"
## listenv          NA                    NA      NA     "no"             "4.2.0"
## lme4             NA                    NA      NA     "yes"            "4.2.0"
## lmerTest         NA                    NA      NA     "no"             "4.2.0"
## lmtest           NA                    NA      NA     "yes"            "4.2.0"
## logspline        NA                    NA      NA     "yes"            "4.2.0"
## loo              NA                    NA      NA     "no"             "4.2.0"
## lubridate        NA                    NA      NA     "yes"            "4.2.0"
## magrittr         NA                    NA      NA     "yes"            "4.2.0"
## mapdata          NA                    NA      NA     "yes"            "4.2.0"
## mapproj          NA                    NA      NA     "yes"            "4.2.0"
## maps             NA                    NA      NA     "yes"            "4.2.0"
## maptools         NA                    NA      NA     "yes"            "4.2.0"
## markdown         NA                    NA      NA     "yes"            "4.2.0"
## MASS             NA                    NA      NA     "yes"            "4.2.1"
## mathjaxr         NA                    NA      NA     "yes"            "4.2.0"
## Matrix           NA                    NA      NA     "yes"            "4.2.0"
## MatrixModels     NA                    NA      NA     "no"             "4.2.0"
## matrixStats      NA                    NA      NA     "yes"            "4.2.0"
## mc2d             NA                    NA      NA     "no"             "4.2.0"
## memoise          NA                    NA      NA     "no"             "4.2.0"
## metaBMA          NA                    NA      NA     "yes"            "4.2.0"
## metadat          NA                    NA      NA     "no"             "4.2.0"
## metafor          NA                    NA      NA     "no"             "4.2.0"
## metaplus         NA                    NA      NA     "no"             "4.2.0"
## methods          NA                    NA      NA     "yes"            "4.2.1"
## mgcv             NA                    NA      NA     "yes"            "4.2.1"
## mime             NA                    NA      NA     "yes"            "4.2.0"
## minqa            NA                    NA      NA     "yes"            "4.2.0"
## mlt              NA                    NA      NA     "yes"            "4.2.0"
## mnormt           NA                    NA      NA     "yes"            "4.2.0"
## modelr           NA                    NA      NA     "no"             "4.2.0"
## modeltools       NA                    NA      NA     "no"             "4.2.0"
## mratios          NA                    NA      NA     "no"             "4.2.0"
## MSwM             NA                    NA      NA     "no"             "4.2.0"
## multcomp         NA                    NA      NA     "no"             "4.2.0"
## multcompView     NA                    NA      NA     "no"             "4.2.0"
## munsell          NA                    NA      NA     "no"             "4.2.0"
## mvtnorm          NA                    NA      NA     "yes"            "4.2.0"
## nlme             NA                    NA      NA     "yes"            "4.2.1"
## nloptr           NA                    NA      NA     "yes"            "4.2.0"
## nnet             NA                    NA      NA     "yes"            "4.2.1"
## numDeriv         NA                    NA      NA     "no"             "4.2.0"
## openssl          NA                    NA      NA     "yes"            "4.2.0"
## orthopolynom     NA                    NA      NA     "no"             "4.2.0"
## packcircles      NA                    NA      NA     "yes"            "4.2.0"
## packrat          NA                    NA      NA     "no"             "4.2.1"
## paletteer        NA                    NA      NA     "no"             "4.2.0"
## palmerpenguins   NA                    NA      NA     "no"             "4.2.0"
## parallel         NA                    NA      NA     "yes"            "4.2.1"
## parallelly       NA                    NA      NA     "no"             "4.2.0"
## parameters       NA                    NA      NA     "no"             "4.2.0"
## patchwork        NA                    NA      NA     "no"             "4.2.0"
## pbapply          NA                    NA      NA     "no"             "4.2.0"
## pbkrtest         NA                    NA      NA     "no"             "4.2.0"
## performance      NA                    NA      NA     "no"             "4.2.0"
## permute          NA                    NA      NA     "no"             "4.2.0"
## pillar           NA                    NA      NA     "no"             "4.2.0"
## pkgbuild         NA                    NA      NA     "no"             "4.2.0"
## pkgconfig        NA                    NA      NA     "no"             "4.2.0"
## pkgload          NA                    NA      NA     "no"             "4.2.0"
## plyr             NA                    NA      NA     "yes"            "4.2.0"
## PMCMRplus        NA                    NA      NA     "yes"            "4.2.0"
## png              NA                    NA      NA     "yes"            "4.2.0"
## polynom          NA                    NA      NA     "no"             "4.2.0"
## praise           NA                    NA      NA     "no"             "4.2.0"
## prettyunits      NA                    NA      NA     "no"             "4.2.0"
## prismatic        NA                    NA      NA     "no"             "4.2.0"
## processx         NA                    NA      NA     "yes"            "4.2.0"
## prodlim          NA                    NA      NA     "yes"            "4.2.0"
## progress         NA                    NA      NA     "no"             "4.2.0"
## progressr        NA                    NA      NA     "no"             "4.2.0"
## proxy            NA                    NA      NA     "yes"            "4.2.0"
## ps               NA                    NA      NA     "yes"            "4.2.0"
## psych            NA                    NA      NA     "no"             "4.2.0"
## purrr            NA                    NA      NA     "yes"            "4.2.0"
## quadprog         NA                    NA      NA     "yes"            "4.2.0"
## quantmod         NA                    NA      NA     "no"             "4.2.0"
## quantreg         NA                    NA      NA     "yes"            "4.2.0"
## R6               NA                    NA      NA     "no"             "4.2.0"
## rappdirs         NA                    NA      NA     "yes"            "4.2.0"
## rARPACK          NA                    NA      NA     "no"             "4.2.0"
## raster           NA                    NA      NA     "yes"            "4.2.0"
## rasterVis        NA                    NA      NA     "no"             "4.2.0"
## RColorBrewer     NA                    NA      NA     "no"             "4.2.0"
## Rcpp             NA                    NA      NA     "yes"            "4.2.0"
## RcppArmadillo    NA                    NA      NA     "yes"            "4.2.0"
## RcppEigen        NA                    NA      NA     "yes"            "4.2.0"
## RcppGSL          NA                    NA      NA     "yes"            "4.2.0"
## RcppParallel     NA                    NA      NA     "yes"            "4.2.0"
## RcppZiggurat     NA                    NA      NA     "yes"            "4.2.0"
## readr            NA                    NA      NA     "yes"            "4.2.0"
## readxl           NA                    NA      NA     "yes"            "4.2.0"
## recipes          NA                    NA      NA     "no"             "4.2.0"
## rematch          NA                    NA      NA     "no"             "4.2.0"
## rematch2         NA                    NA      NA     "no"             "4.2.0"
## remotes          NA                    NA      NA     "no"             "4.2.0"
## reprex           NA                    NA      NA     "no"             "4.2.0"
## reshape          NA                    NA      NA     "yes"            "4.2.0"
## reshape2         NA                    NA      NA     "yes"            "4.2.0"
## rex              NA                    NA      NA     "no"             "4.2.0"
## Rfast            NA                    NA      NA     "yes"            "4.2.0"
## rgdal            NA                    NA      NA     "yes"            "4.2.0"
## rlang            NA                    NA      NA     "yes"            "4.2.0"
## rmarkdown        NA                    NA      NA     "no"             "4.2.1"
## Rmpfr            NA                    NA      NA     "yes"            "4.2.0"
## rngtools         NA                    NA      NA     "no"             "4.2.0"
## robustbase       NA                    NA      NA     "yes"            "4.2.0"
## ROCR             NA                    NA      NA     "no"             "4.2.0"
## rpart            NA                    NA      NA     "yes"            "4.2.1"
## rprojroot        NA                    NA      NA     "no"             "4.2.0"
## rsconnect        NA                    NA      NA     "no"             "4.2.1"
## RSpectra         NA                    NA      NA     "yes"            "4.2.0"
## rstan            NA                    NA      NA     "yes"            "4.2.0"
## rstantools       NA                    NA      NA     "no"             "4.2.0"
## rstatix          NA                    NA      NA     "no"             "4.2.0"
## rstudioapi       NA                    NA      NA     "no"             "4.2.0"
## Rttf2pt1         NA                    NA      NA     "yes"            "4.2.0"
## rvest            NA                    NA      NA     "no"             "4.2.0"
## s2               NA                    NA      NA     "yes"            "4.2.0"
## sandwich         NA                    NA      NA     "no"             "4.2.0"
## sass             NA                    NA      NA     "yes"            "4.2.0"
## scales           NA                    NA      NA     "no"             "4.2.0"
## selectr          NA                    NA      NA     "no"             "4.2.0"
## sf               NA                    NA      NA     "yes"            "4.2.0"
## shape            NA                    NA      NA     "no"             "4.2.0"
## SimComp          NA                    NA      NA     "no"             "4.2.0"
## sm               NA                    NA      NA     "yes"            "4.2.0"
## sp               NA                    NA      NA     "yes"            "4.2.0"
## SparseM          NA                    NA      NA     "yes"            "4.2.0"
## spatial          NA                    NA      NA     "yes"            "4.2.1"
## spelling         NA                    NA      NA     "no"             "4.2.0"
## splines          NA                    NA      NA     "yes"            "4.2.1"
## SQUAREM          NA                    NA      NA     "no"             "4.2.0"
## stabledist       NA                    NA      NA     "no"             "4.2.0"
## StanHeaders      NA                    NA      NA     "yes"            "4.2.0"
## stats            NA                    NA      NA     "yes"            "4.2.1"
## stats4           NA                    NA      NA     NA               "4.2.1"
## statsExpressions NA                    NA      NA     "no"             "4.2.0"
## stringi          NA                    NA      NA     "yes"            "4.2.0"
## stringr          NA                    NA      NA     "no"             "4.2.0"
## strucchange      NA                    NA      NA     "yes"            "4.2.0"
## SuppDists        NA                    NA      NA     "yes"            "4.2.0"
## survival         NA                    NA      NA     "yes"            "4.2.1"
## survPresmooth    NA                    NA      NA     "yes"            "4.2.0"
## svglite          NA                    NA      NA     "yes"            "4.2.0"
## sys              NA                    NA      NA     "yes"            "4.2.0"
## systemfonts      NA                    NA      NA     "yes"            "4.2.0"
## tcltk            NA                    NA      NA     "yes"            "4.2.1"
## terra            NA                    NA      NA     "yes"            "4.2.0"
## testthat         NA                    NA      NA     "yes"            "4.2.0"
## TH.data          NA                    NA      NA     "no"             "4.2.0"
## tibble           NA                    NA      NA     "yes"            "4.2.0"
## tidyr            NA                    NA      NA     "yes"            "4.2.0"
## tidyselect       NA                    NA      NA     "no"             "4.2.0"
## tidyverse        NA                    NA      NA     "no"             "4.2.0"
## timeDate         NA                    NA      NA     "no"             "4.2.0"
## timeSeries       NA                    NA      NA     "no"             "4.2.0"
## tinytex          NA                    NA      NA     "no"             "4.2.0"
## TMB              NA                    NA      NA     "yes"            "4.2.0"
## tools            NA                    NA      NA     "yes"            "4.2.1"
## tram             NA                    NA      NA     "yes"            "4.2.1"
## tseries          NA                    NA      NA     "yes"            "4.2.0"
## TTR              NA                    NA      NA     "yes"            "4.2.0"
## tzdb             NA                    NA      NA     "yes"            "4.2.0"
## units            NA                    NA      NA     "yes"            "4.2.0"
## unmarked         NA                    NA      NA     "yes"            "4.2.0"
## urca             NA                    NA      NA     "yes"            "4.2.0"
## utf8             NA                    NA      NA     "yes"            "4.2.0"
## utils            NA                    NA      NA     "yes"            "4.2.1"
## uuid             NA                    NA      NA     "yes"            "4.2.0"
## variables        NA                    NA      NA     "no"             "4.2.0"
## vars             NA                    NA      NA     "no"             "4.2.0"
## vctrs            NA                    NA      NA     "yes"            "4.2.0"
## vdiffr           NA                    NA      NA     "yes"            "4.2.0"
## vegan            NA                    NA      NA     "yes"            "4.2.0"
## VGAM             NA                    NA      NA     "yes"            "4.2.0"
## vioplot          NA                    NA      NA     "no"             "4.2.0"
## viridis          NA                    NA      NA     "no"             "4.2.0"
## viridisLite      NA                    NA      NA     "no"             "4.2.0"
## vroom            NA                    NA      NA     "yes"            "4.2.0"
## waldo            NA                    NA      NA     "no"             "4.2.0"
## withr            NA                    NA      NA     "no"             "4.2.0"
## wk               NA                    NA      NA     "yes"            "4.2.0"
## WRS2             NA                    NA      NA     "yes"            "4.2.0"
## xfun             NA                    NA      NA     "yes"            "4.2.0"
## xml2             NA                    NA      NA     "yes"            "4.2.0"
## xmlparsedata     NA                    NA      NA     "no"             "4.2.0"
## xtable           NA                    NA      NA     "no"             "4.2.0"
## xts              NA                    NA      NA     "yes"            "4.2.0"
## yaml             NA                    NA      NA     "yes"            "4.2.0"
## zeallot          NA                    NA      NA     "no"             "4.2.0"
## zoo              NA                    NA      NA     "yes"            "4.2.0"
#install.packages("vegan", dependencies=TRUE)
library(vegan)
## Loading required package: permute
## Loading required package: lattice
## This is vegan 2.6-2
#remove.packages("vegan")

##Project Management

  1. Set up management structure (i.e., “data”, “src”, “results”, and “doc”)
  2. Discuss avoiding redundancy of files
  3. Make sure to use version control

##Getting Help

?plot
## Help on topic 'plot' was found in the following packages:
## 
##   Package               Library
##   base                  /Library/Frameworks/R.framework/Resources/library
##   graphics              /Library/Frameworks/R.framework/Versions/4.2/Resources/library
## 
## 
## Using the first match ...
help(plot)
## Help on topic 'plot' was found in the following packages:
## 
##   Package               Library
##   base                  /Library/Frameworks/R.framework/Resources/library
##   graphics              /Library/Frameworks/R.framework/Versions/4.2/Resources/library
## 
## 
## Using the first match ...
vignette("FAQ-vegan")
## starting httpd help server ... done
citation("vegan")
## 
## To cite package 'vegan' in publications use:
## 
##   Oksanen J, Simpson G, Blanchet F, Kindt R, Legendre P, Minchin P,
##   O'Hara R, Solymos P, Stevens M, Szoecs E, Wagner H, Barbour M,
##   Bedward M, Bolker B, Borcard D, Carvalho G, Chirico M, De Caceres M,
##   Durand S, Evangelista H, FitzJohn R, Friendly M, Furneaux B, Hannigan
##   G, Hill M, Lahti L, McGlinn D, Ouellette M, Ribeiro Cunha E, Smith T,
##   Stier A, Ter Braak C, Weedon J (2022). _vegan: Community Ecology
##   Package_. R package version 2.6-2,
##   <https://CRAN.R-project.org/package=vegan>.
## 
## A BibTeX entry for LaTeX users is
## 
##   @Manual{,
##     title = {vegan: Community Ecology Package},
##     author = {Jari Oksanen and Gavin L. Simpson and F. Guillaume Blanchet and Roeland Kindt and Pierre Legendre and Peter R. Minchin and R.B. O'Hara and Peter Solymos and M. Henry H. Stevens and Eduard Szoecs and Helene Wagner and Matt Barbour and Michael Bedward and Ben Bolker and Daniel Borcard and Gustavo Carvalho and Michael Chirico and Miquel {De Caceres} and Sebastien Durand and Heloisa Beatriz Antoniazi Evangelista and Rich FitzJohn and Michael Friendly and Brendan Furneaux and Geoffrey Hannigan and Mark O. Hill and Leo Lahti and Dan McGlinn and Marie-Helene Ouellette and Eduardo {Ribeiro Cunha} and Tyler Smith and Adrian Stier and Cajo J.F. {Ter Braak} and James Weedon},
##     year = {2022},
##     note = {R package version 2.6-2},
##     url = {https://CRAN.R-project.org/package=vegan},
##   }

##Data and their formats

cats <- data.frame(coat =c("calico", "black", "tabby"),
                   weight = c(2.1, 5, 3.2), 
                   likes_string = c(1, 0, 1))
cats
#write.csv(cats, file = "./data/cats.csv")
#cats <- read.csv("./data/cats.")
cats$coat
## [1] "calico" "black"  "tabby"
log(cats$weight)
## [1] 0.7419373 1.6094379 1.1631508
logweight <- log(cats$weight)
cbind(cats, logweight)
cats <- cbind(cats, logweight)
paste("My cat is", cats$coat, ", and it weighs", cats$weight, "kg.", sep="")
## [1] "My cat iscalico, and it weighs2.1kg."
## [2] "My cat isblack, and it weighs5kg."   
## [3] "My cat istabby, and it weighs3.2kg."

Data Types

typeof(cats$coat)
## [1] "character"
typeof(cats$weight)
## [1] "double"
typeof(cats$likes_string)
## [1] "double"
typeof(3.14159)
## [1] "double"
typeof("FALSE")
## [1] "character"
typeof(T)
## [1] "logical"
typeof(F)
## [1] "logical"
typeof(cats)
## [1] "list"
file.show("./data/cats.csv")
#cats$likes_string <- as.logical(cats$like_string)
typeof(cats$likes_string)
## [1] "double"
c("a", "b")
## [1] "a" "b"
ab <- c("a", "b")
ab
## [1] "a" "b"
c(ab, "c")
## [1] "a" "b" "c"
1:10
##  [1]  1  2  3  4  5  6  7  8  9 10
seq(10)
##  [1]  1  2  3  4  5  6  7  8  9 10
z <- seq(10)
head(z, n=3)
## [1] 1 2 3
class(z)
## [1] "integer"
typeof(z)
## [1] "integer"
seq(1,100, by=5)
##  [1]  1  6 11 16 21 26 31 36 41 46 51 56 61 66 71 76 81 86 91 96

Data Frames

cats
str(cats$coat)
##  chr [1:3] "calico" "black" "tabby"
coats <- c("tabby", "tortoiseshell", "tortoiseshell", "black", "tabby")
coats
## [1] "tabby"         "tortoiseshell" "tortoiseshell" "black"        
## [5] "tabby"
str(coats)
##  chr [1:5] "tabby" "tortoiseshell" "tortoiseshell" "black" "tabby"
factor(coats)
## [1] tabby         tortoiseshell tortoiseshell black         tabby        
## Levels: black tabby tortoiseshell
categories <- factor(coats)
class(coats)
## [1] "character"
class(categories)
## [1] "factor"
str(categories)
##  Factor w/ 3 levels "black","tabby",..: 2 3 3 1 2

Lists

list_example <-list(title="numbers", numbers=1:10, data=TRUE)
list_example
## $title
## [1] "numbers"
## 
## $numbers
##  [1]  1  2  3  4  5  6  7  8  9 10
## 
## $data
## [1] TRUE
another_list <- list(1, "a", TRUE, 1+1i)
another_list
## [[1]]
## [1] 1
## 
## [[2]]
## [1] "a"
## 
## [[3]]
## [1] TRUE
## 
## [[4]]
## [1] 1+1i
typeof(list_example)
## [1] "list"
class(list_example)
## [1] "list"
typeof(cats)
## [1] "list"
class(cats)
## [1] "data.frame"
data.frame(list_example)
cats
cats[,3]
## [1] 1 0 1
cats[2:3, c(1,3)]

Matricies

matrix_example <- matrix(0, ncol=5, nrow=3)
matrix_example
##      [,1] [,2] [,3] [,4] [,5]
## [1,]    0    0    0    0    0
## [2,]    0    0    0    0    0
## [3,]    0    0    0    0    0
class(matrix_example)
## [1] "matrix" "array"
typeof(matrix_example)
## [1] "double"
str(matrix_example)
##  num [1:3, 1:5] 0 0 0 0 0 0 0 0 0 0 ...
dim(matrix_example)
## [1] 3 5
ncol(matrix_example)
## [1] 5
class(data.frame(matrix_example))
## [1] "data.frame"
df_example <- data.frame(matrix_example)
df_example

Subsetting

p <- c(2.3, 6.9, 4.0, 23, 1)
p
## [1]  2.3  6.9  4.0 23.0  1.0
names(p) <- c('a', 'b', 'c', 'd', 'e')
p
##    a    b    c    d    e 
##  2.3  6.9  4.0 23.0  1.0
p[1]
##   a 
## 2.3
p[2:4]
##    b    c    d 
##  6.9  4.0 23.0
p[c(1,5)]
##   a   e 
## 2.3 1.0
p[c(1,1,1,3,5,5)]
##   a   a   a   c   e   e 
## 2.3 2.3 2.3 4.0 1.0 1.0
p[6]
## <NA> 
##   NA
p[-3]
##    a    b    d    e 
##  2.3  6.9 23.0  1.0
p[-(2:4)]
##   a   e 
## 2.3 1.0
p[c('a', 'c')]
##   a   c 
## 2.3 4.0
p[c(T,F,T,F,T)]
##   a   c   e 
## 2.3 4.0 1.0
p[names(p) != 'c']
##    a    b    d    e 
##  2.3  6.9 23.0  1.0

Factors

f <- factor(c('a', 'b', 'c', 'd', 'e'))
f 
## [1] a b c d e
## Levels: a b c d e
f[f == 'a']
## [1] a
## Levels: a b c d e
f[1:3]
## [1] a b c
## Levels: a b c d e
f[f %in% c('b', 'c')]
## [1] b c
## Levels: a b c d e
f[-3]
## [1] a b d e
## Levels: a b c d e
f2 <- factor(c('a', 'a', 'b', 'c', 'c'))
f2
## [1] a a b c c
## Levels: a b c
f2[f2 == 'a']
## [1] a a
## Levels: a b c
f2[ f2 %in% c('a', 'c')]
## [1] a a c c
## Levels: a b c

Matricies resumed

set.seed(65)
m <- matrix(rnorm(6*4), ncol=4, nrow=6)
m
##            [,1]       [,2]       [,3]        [,4]
## [1,] -1.1968205 -0.3943568  0.4232027 -2.34367583
## [2,] -0.9516674 -1.2484030 -1.8461725 -0.77605977
## [3,]  0.2786364 -0.6521289 -0.2456747 -2.16173144
## [4,] -1.4449411 -1.1707346  1.2538299  0.05701057
## [5,]  0.8216518  0.3604497  1.5633419 -0.24867199
## [6,]  1.2470188  1.2302708 -1.2644661 -0.07830796
m[3:4, c(3,1)]
##            [,1]       [,2]
## [1,] -0.2456747  0.2786364
## [2,]  1.2538299 -1.4449411
m[,c(3,4)]
##            [,1]        [,2]
## [1,]  0.4232027 -2.34367583
## [2,] -1.8461725 -0.77605977
## [3,] -0.2456747 -2.16173144
## [4,]  1.2538299  0.05701057
## [5,]  1.5633419 -0.24867199
## [6,] -1.2644661 -0.07830796

Lists Revisited

xlist <- list(a="BIOL48006220", b=seq(1,10, by = 0.5), data="Grade")
xlist
## $a
## [1] "BIOL48006220"
## 
## $b
##  [1]  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0
## [16]  8.5  9.0  9.5 10.0
## 
## $data
## [1] "Grade"
xlist[1:2]
## $a
## [1] "BIOL48006220"
## 
## $b
##  [1]  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0
## [16]  8.5  9.0  9.5 10.0
xlist['a']
## $a
## [1] "BIOL48006220"
xlist[['a']]
## [1] "BIOL48006220"
xlist['b']
## $b
##  [1]  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0
## [16]  8.5  9.0  9.5 10.0
xlist[['b']]
##  [1]  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0
## [16]  8.5  9.0  9.5 10.0
xlist$b
##  [1]  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0
## [16]  8.5  9.0  9.5 10.0

Data Frames Revisited

gp <-read.csv('~/Desktop/Practical Computing /biol48806220_Fall2022/data/forest_area_sq_km.csv')
head(gp, n=10L)
head(gp[3], n=10L)
nrow(gp)
## [1] 214
head(gp[["country"]], 10L)
##  [1] "Aruba"                "Afghanistan"          "Angola"              
##  [4] "Albania"              "Andorra"              "United Arab Emirates"
##  [7] "Argentina"            "Armenia"              "American Samoa"      
## [10] "Antigua and Barbuda"
gp$X2001
##   [1] "4.2"   "12.1k" "766k"  "7720"  "160"   "3110"  "327k"  "3320"  "177"  
##  [10] "93.2"  "1.31M" "38.4k" "9960"  "1940"  "6720"  "40.4k" "71.2k" "19.1k"
##  [19] "34.5k" "4"     "5100"  "21.1k" "83.4k" "14.5k" "10"    "547k"  "5.43M"
##  [28] "63"    "3940"  "26.3k" "174k"  "228k"  "3.48M" "8.68"  "12k"   "160k" 
##  [37] "1.82M" "48.7k" "215k"  "1.43M" "222k"  "623k"  "408"   "403"   "28.6k"
##  [46] "25.3k" "129"   "1720"  "26.4k" "114k"  "56"    "479"   "5750"  "19.9k"
##  [55] "16.5k" "136k"  "605"   "11.1k" "174k"  "22.6k" "184k"  "224k"  "10.2k"
##  [64] "155k"  "0.8"   "639"   "237k"  "34.6"  "29.8k" "27.7k" "86.7k" "0"    
##  [73] "68.6k" "3460"  "21.3k" "26k"   "36.6k" "177"   "2.2"   "41.1k" "240"  
##  [82] "186k"  "67.4k" "18.9k" "3800"  "19.5k" "1.01M" "680k"  "6480"  "96k"  
##  [91] "8190"  "328"   "1530"  "85k"   "5280"  "975"   "249k"  "31.4k" "38.9k"
## [100] "11.9k" "107k"  "11.8"  "110"   "64.6k" "51.3"  "173k"  "1380"  "81.6k"
## [109] "2170"  "210"   "67"    "21.5k" "345"   "20.5k" "871"   "32.7k" "10"   
## [118] "55.4k" "0"     "3500"  "129k"  "8.2"   "681k"  "94"    "9580"  "133k" 
## [127] "3.5"   "342k"  "6260"  "142k"  "316"   "407k"  "4110"  "412"   "30k"  
## [136] "195k"  "79.2k" "8380"  "13k"   "246k"  "51.6k" "3620"  ""      "121k" 
## [145] "58.2k" "0"     "98.5k" "30"    "44.3k" "44.2k" "750k"  "72.2k" "398"  
## [154] "363k"  "91.1k" "4420"  "64.1k" "32.8k" "223k"  "91.2"  "1490"  "0"    
## [163] "64k"   "8.1M"  "2830"  "9770"  ""      "87.8k" "172"   "25.4k" "28.9k"
## [172] "6650"  "10"    "73.6k" "24.8k" ""      "583"   "153k"  "19k"   "12.4k"
## [181] "281k"  "4760"  ""      "337"   "4440"  "105"   "61.9k" "12.6k" "192k" 
## [190] "4100"  "41.3k" "9460"  "89.5"  "2360"  "6720"  "203k"  "10"    "529k" 
## [199] "30.8k" "95.2k" "14.4k" "3.05M" "30.4k" "285"   "488k"  "36.6"  "201"  
## [208] "121k"  "4420"  "1700"  "5490"  "177k"  "470k"  "183k"
gp[c(1:3), 2:5]
gp[ which(gp$X1989 <= 100 & gp$X2019 >= 100),]

Conditionals and Flow

n <- 10

if (n < 10) {
 print ("n is less than 10")
}  else if (n > 10) {
  print ("n is greater than 10")
}  else {
  print ("n is equal to 10")
  
}  
## [1] "n is equal to 10"
for (n in seq(1,20)) {
  if (n < 10) {
    print ("n is less than 10")
}   else if (n > 10) {
    print ("n is greater than 10")
}   else {
    print ("n is equal to 10")
  }
} 
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is less than 10"
## [1] "n is equal to 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
## [1] "n is greater than 10"
g <- 0

while (g <= 10) {
  print(paste(g, "is less than or equal to 10"))
  g <- g+1
}
## [1] "0 is less than or equal to 10"
## [1] "1 is less than or equal to 10"
## [1] "2 is less than or equal to 10"
## [1] "3 is less than or equal to 10"
## [1] "4 is less than or equal to 10"
## [1] "5 is less than or equal to 10"
## [1] "6 is less than or equal to 10"
## [1] "7 is less than or equal to 10"
## [1] "8 is less than or equal to 10"
## [1] "9 is less than or equal to 10"
## [1] "10 is less than or equal to 10"

Plotting and Figures

#install.packages("ggplot2")
library(ggplot2)
gp <- read.csv('~/Desktop/Practical Computing /biol48806220_Fall2022/Data/gapminder_all.csv')

head(gp)
ggplot(data=gp, mapping=aes(x=gdpPercap_1952, y=pop_1952)) + geom_point()

ggplot(data=gp, mapping=aes(x=gdpPercap_2002, y=pop_2002)) + geom_point()

gapminder <- read.csv("https://raw.githubusercontent.com/swcarpentry/r-novice-gapminder/gh-pages/_episodes_rmd/data/gapminder_data.csv")
head(gapminder)
ggplot(data=gapminder, mapping=aes(x=gdpPercap, y=lifeExp)) + geom_point()

ggplot(data=gapminder, mapping=aes(x=year, y=lifeExp, by=country, color=continent)) +geom_line()

ggplot(data=gapminder, mapping=aes(x=year, y=lifeExp, by=country)) + geom_line(mapping=aes(color=continent)) + geom_line()

To transfer an expoential graph to use a regression line, use log10()

ggplot(data=gapminder, mapping=aes(x=gdpPercap, y=lifeExp)) + geom_point(alpha=0.25) + scale_x_log10()

ggplot(data=gapminder, mapping=aes(x=gdpPercap, y=lifeExp)) + geom_point(alpha=0.25, color="purple", size=0.9) + scale_x_log10() + geom_smooth(method = lm, color="gold", size=1.25)
## Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
## ℹ Please use `linewidth` instead.
## `geom_smooth()` using formula = 'y ~ x'

africas <- gapminder[gapminder$continent=="Africa", ]
head(africas)
ggplot(data=africas, mapping=aes(x=year, y=lifeExp)) + 
  geom_line(color = "red") + 
  facet_wrap( ~ country) +
  theme(axis.text.x = element_text(angle = 90)) +
  labs(
    x = "Year", 
    y = "Life Expectency", 
    title = "Life Expectency Over Time in African Countries", 
  )

AfricanLifeExp <- ggplot(data=africas, mapping=aes(x=year, y=lifeExp)) + 
  geom_line(color = "red") + 
  facet_wrap( ~ country) +
  theme(axis.text.x = element_text(angle = 90)) +
  labs(
    x = "Year", 
    y = "Life Expectency", 
    title = "Life Expectency Over Time in African Countries", 
  )
ggsave(filename = "~/Desktop/Practical Computing /biol48806220_Fall2022/Data/AfricanLifeExp.png", plot = AfricanLifeExp, width = 24, height = 40, dpi = 300, units = "cm")
pdf(file = "~/Desktop/Practical Computing /biol48806220_Fall2022/Results/AfricanLifeExp.png", width = 24, height = 40)
plot(AfricanLifeExp)
dev.off()
## quartz_off_screen 
##                 2
write.table(gapminder, file = "~/Desktop/Practical Computing /biol48806220_Fall2022/data/gapminder_web.csv", sep=",")
write.csv(africas, file = "~/Desktop/Practical Computing /biol48806220_Fall2022/data/gapminder_web_africas.csv")

Fancy Plots

#install.packages(c("ggridges", "viridis", "hrbrthemes"), dependencies=T)
library(ggridges)
library(ggplot2)
library(viridis)
## Loading required package: viridisLite
library(hrbrthemes)
## NOTE: Either Arial Narrow or Roboto Condensed fonts are required to use these themes.
##       Please use hrbrthemes::import_roboto_condensed() to install Roboto Condensed and
##       if Arial Narrow is not on your system, please see https://bit.ly/arialnarrow
#plot
ggplot(lincoln_weather, aes(x = 'Mean Temperature [F]', y = 'Month', fill = ..x..)) +
  geom_density_ridges_gradient(scale = 3, rel_min_height = 0.01) + 
  scale_fill_viridis(name = "Temp. [F]", option = "C") + 
  labs(title = 'Temperatures in Lincoln NE in 2016') + 
  theme_ipsum() +
    theme(
      legend.position="none", 
      panel.spacing = unit(0.1, "lines"), 
      strip.text.x = element_text(size = 8)
    )
## Warning: The dot-dot notation (`..x..`) was deprecated in ggplot2 3.4.0.
## ℹ Please use `after_stat(x)` instead.
## Picking joint bandwidth of 0.276

spider_data <-read.csv(file="https://wsc.nmbe.ch/resources/species_export_20221207.csv", header=TRUE)
spider_data
library(ggridges)
library(ggplot2)
library(viridis)
library(hrbrthemes)

#plot
ggplot(spider_data[1:5000,], aes(x = 'year', y = 'family')) +
  geom_density_ridges(alpha=0.6, stat = "binline", bins=20) +
  geom_density_ridges_gradient(scale = 3, rel_min_height = 0.01) +
  labs(title = 'Spider species descriptions over time by family') +
  xlab(label = "species description year") +
  ylab(label = "spider family") + 
  theme_ridges() + 
    theme(
      legend.position="none",
      panel.spacing = unit(0.1, "lines"),
      strip.text.x = element_text(size = 8)
    )
## Picking joint bandwidth of 0.164

#install.packages(c("ggstatsplot", "palmerpenguins", "tidyverse"), dependencies = T)
library(ggstatsplot)
## You can cite this package as:
##      Patil, I. (2021). Visualizations with statistical details: The 'ggstatsplot' approach.
##      Journal of Open Source Software, 6(61), 3167, doi:10.21105/joss.03167
library(tidyverse)
## ── Attaching packages
## ───────────────────────────────────────
## tidyverse 1.3.2 ──
## ✔ tibble  3.1.8      ✔ dplyr   1.0.10
## ✔ tidyr   1.2.1      ✔ stringr 1.4.1 
## ✔ readr   2.1.3      ✔ forcats 0.5.2 
## ✔ purrr   0.3.5      
## ── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
## ✖ dplyr::filter() masks stats::filter()
## ✖ dplyr::lag()    masks stats::lag()
data("penguins", package = "palmerpenguins")
penguins
penguins2 <- drop_na(penguins)
penguins2
plt <- ggbetweenstats(
  data = penguins, 
  x = species, 
  y = bill_length_mm
)
plt

gapminder2 <- drop_na(gapminder)
boxplot(gapminder2$lifeExp ~ gapminder2$continent)

#install.packages("vioplot", dependencies = T)
library(vioplot)
## Loading required package: sm
## Package 'sm', version 2.2-5.7: type help(sm) for summary information
## Loading required package: zoo
## 
## Attaching package: 'zoo'
## The following objects are masked from 'package:base':
## 
##     as.Date, as.Date.numeric
with(gapminder2, vioplot(
  lifeExp~continent#, col = "blue"
))

plt2 <- plt +
  theme(
    axis.ticks = element_blank(), 
    axis.line = element_line(color = "grey50"), 
    panel.grid = element_line(color = "#b4aea9"), 
    panel.grid.minor = element_blank(), 
    panel.grid.major.x = element_blank(), 
    panel.grid.major.y = element_line(linetype = "dashed"), 
    panel.background = element_rect(fill = "#fbf9f4", color = "#fbf9f4"), 
    plot.background = element_rect(fill = "#fbf9f4", color = "#fbf9f4")
  ) +
  labs(
    x = "continent", 
    y = "Life Expectency (years)", 
    title = "Life expectency of people living in each continent "
  )
plt2

#ggsave(
 
# filename = "results/gapminder_lifeExpxcontinentweb-violinplot-with-ggstatsplot.png", 
 # plot = plt2, 
  
#width = 8, 
 # height = 8, 
  #device = "png"
#)
#get the shapefile of Africa
#install.packages("maptools")
library(maptools)
## Loading required package: sp
## Checking rgeos availability: FALSE
## Please note that 'maptools' will be retired during 2023,
## plan transition at your earliest convenience;
## some functionality will be moved to 'sp'.
##      Note: when rgeos is not available, polygon geometry     computations in maptools depend on gpclib,
##      which has a restricted licence. It is disabled by default;
##      to enable gpclib, type gpclibPermit()
data(wrld_simpl)
afr=wrld_simpl[wrld_simpl$REGION==2,]

#we can visualize the region's boundaries with the plot function
plot(afr)

penguins2
penguin_matrix <- with(penguins2, cbind(bill_length_mm, bill_depth_mm, flipper_length_mm, body_mass_g))
penguin_matrix
##        bill_length_mm bill_depth_mm flipper_length_mm body_mass_g
##   [1,]           39.1          18.7               181        3750
##   [2,]           39.5          17.4               186        3800
##   [3,]           40.3          18.0               195        3250
##   [4,]           36.7          19.3               193        3450
##   [5,]           39.3          20.6               190        3650
##   [6,]           38.9          17.8               181        3625
##   [7,]           39.2          19.6               195        4675
##   [8,]           41.1          17.6               182        3200
##   [9,]           38.6          21.2               191        3800
##  [10,]           34.6          21.1               198        4400
##  [11,]           36.6          17.8               185        3700
##  [12,]           38.7          19.0               195        3450
##  [13,]           42.5          20.7               197        4500
##  [14,]           34.4          18.4               184        3325
##  [15,]           46.0          21.5               194        4200
##  [16,]           37.8          18.3               174        3400
##  [17,]           37.7          18.7               180        3600
##  [18,]           35.9          19.2               189        3800
##  [19,]           38.2          18.1               185        3950
##  [20,]           38.8          17.2               180        3800
##  [21,]           35.3          18.9               187        3800
##  [22,]           40.6          18.6               183        3550
##  [23,]           40.5          17.9               187        3200
##  [24,]           37.9          18.6               172        3150
##  [25,]           40.5          18.9               180        3950
##  [26,]           39.5          16.7               178        3250
##  [27,]           37.2          18.1               178        3900
##  [28,]           39.5          17.8               188        3300
##  [29,]           40.9          18.9               184        3900
##  [30,]           36.4          17.0               195        3325
##  [31,]           39.2          21.1               196        4150
##  [32,]           38.8          20.0               190        3950
##  [33,]           42.2          18.5               180        3550
##  [34,]           37.6          19.3               181        3300
##  [35,]           39.8          19.1               184        4650
##  [36,]           36.5          18.0               182        3150
##  [37,]           40.8          18.4               195        3900
##  [38,]           36.0          18.5               186        3100
##  [39,]           44.1          19.7               196        4400
##  [40,]           37.0          16.9               185        3000
##  [41,]           39.6          18.8               190        4600
##  [42,]           41.1          19.0               182        3425
##  [43,]           36.0          17.9               190        3450
##  [44,]           42.3          21.2               191        4150
##  [45,]           39.6          17.7               186        3500
##  [46,]           40.1          18.9               188        4300
##  [47,]           35.0          17.9               190        3450
##  [48,]           42.0          19.5               200        4050
##  [49,]           34.5          18.1               187        2900
##  [50,]           41.4          18.6               191        3700
##  [51,]           39.0          17.5               186        3550
##  [52,]           40.6          18.8               193        3800
##  [53,]           36.5          16.6               181        2850
##  [54,]           37.6          19.1               194        3750
##  [55,]           35.7          16.9               185        3150
##  [56,]           41.3          21.1               195        4400
##  [57,]           37.6          17.0               185        3600
##  [58,]           41.1          18.2               192        4050
##  [59,]           36.4          17.1               184        2850
##  [60,]           41.6          18.0               192        3950
##  [61,]           35.5          16.2               195        3350
##  [62,]           41.1          19.1               188        4100
##  [63,]           35.9          16.6               190        3050
##  [64,]           41.8          19.4               198        4450
##  [65,]           33.5          19.0               190        3600
##  [66,]           39.7          18.4               190        3900
##  [67,]           39.6          17.2               196        3550
##  [68,]           45.8          18.9               197        4150
##  [69,]           35.5          17.5               190        3700
##  [70,]           42.8          18.5               195        4250
##  [71,]           40.9          16.8               191        3700
##  [72,]           37.2          19.4               184        3900
##  [73,]           36.2          16.1               187        3550
##  [74,]           42.1          19.1               195        4000
##  [75,]           34.6          17.2               189        3200
##  [76,]           42.9          17.6               196        4700
##  [77,]           36.7          18.8               187        3800
##  [78,]           35.1          19.4               193        4200
##  [79,]           37.3          17.8               191        3350
##  [80,]           41.3          20.3               194        3550
##  [81,]           36.3          19.5               190        3800
##  [82,]           36.9          18.6               189        3500
##  [83,]           38.3          19.2               189        3950
##  [84,]           38.9          18.8               190        3600
##  [85,]           35.7          18.0               202        3550
##  [86,]           41.1          18.1               205        4300
##  [87,]           34.0          17.1               185        3400
##  [88,]           39.6          18.1               186        4450
##  [89,]           36.2          17.3               187        3300
##  [90,]           40.8          18.9               208        4300
##  [91,]           38.1          18.6               190        3700
##  [92,]           40.3          18.5               196        4350
##  [93,]           33.1          16.1               178        2900
##  [94,]           43.2          18.5               192        4100
##  [95,]           35.0          17.9               192        3725
##  [96,]           41.0          20.0               203        4725
##  [97,]           37.7          16.0               183        3075
##  [98,]           37.8          20.0               190        4250
##  [99,]           37.9          18.6               193        2925
## [100,]           39.7          18.9               184        3550
## [101,]           38.6          17.2               199        3750
## [102,]           38.2          20.0               190        3900
## [103,]           38.1          17.0               181        3175
## [104,]           43.2          19.0               197        4775
## [105,]           38.1          16.5               198        3825
## [106,]           45.6          20.3               191        4600
## [107,]           39.7          17.7               193        3200
## [108,]           42.2          19.5               197        4275
## [109,]           39.6          20.7               191        3900
## [110,]           42.7          18.3               196        4075
## [111,]           38.6          17.0               188        2900
## [112,]           37.3          20.5               199        3775
## [113,]           35.7          17.0               189        3350
## [114,]           41.1          18.6               189        3325
## [115,]           36.2          17.2               187        3150
## [116,]           37.7          19.8               198        3500
## [117,]           40.2          17.0               176        3450
## [118,]           41.4          18.5               202        3875
## [119,]           35.2          15.9               186        3050
## [120,]           40.6          19.0               199        4000
## [121,]           38.8          17.6               191        3275
## [122,]           41.5          18.3               195        4300
## [123,]           39.0          17.1               191        3050
## [124,]           44.1          18.0               210        4000
## [125,]           38.5          17.9               190        3325
## [126,]           43.1          19.2               197        3500
## [127,]           36.8          18.5               193        3500
## [128,]           37.5          18.5               199        4475
## [129,]           38.1          17.6               187        3425
## [130,]           41.1          17.5               190        3900
## [131,]           35.6          17.5               191        3175
## [132,]           40.2          20.1               200        3975
## [133,]           37.0          16.5               185        3400
## [134,]           39.7          17.9               193        4250
## [135,]           40.2          17.1               193        3400
## [136,]           40.6          17.2               187        3475
## [137,]           32.1          15.5               188        3050
## [138,]           40.7          17.0               190        3725
## [139,]           37.3          16.8               192        3000
## [140,]           39.0          18.7               185        3650
## [141,]           39.2          18.6               190        4250
## [142,]           36.6          18.4               184        3475
## [143,]           36.0          17.8               195        3450
## [144,]           37.8          18.1               193        3750
## [145,]           36.0          17.1               187        3700
## [146,]           41.5          18.5               201        4000
## [147,]           46.1          13.2               211        4500
## [148,]           50.0          16.3               230        5700
## [149,]           48.7          14.1               210        4450
## [150,]           50.0          15.2               218        5700
## [151,]           47.6          14.5               215        5400
## [152,]           46.5          13.5               210        4550
## [153,]           45.4          14.6               211        4800
## [154,]           46.7          15.3               219        5200
## [155,]           43.3          13.4               209        4400
## [156,]           46.8          15.4               215        5150
## [157,]           40.9          13.7               214        4650
## [158,]           49.0          16.1               216        5550
## [159,]           45.5          13.7               214        4650
## [160,]           48.4          14.6               213        5850
## [161,]           45.8          14.6               210        4200
## [162,]           49.3          15.7               217        5850
## [163,]           42.0          13.5               210        4150
## [164,]           49.2          15.2               221        6300
## [165,]           46.2          14.5               209        4800
## [166,]           48.7          15.1               222        5350
## [167,]           50.2          14.3               218        5700
## [168,]           45.1          14.5               215        5000
## [169,]           46.5          14.5               213        4400
## [170,]           46.3          15.8               215        5050
## [171,]           42.9          13.1               215        5000
## [172,]           46.1          15.1               215        5100
## [173,]           47.8          15.0               215        5650
## [174,]           48.2          14.3               210        4600
## [175,]           50.0          15.3               220        5550
## [176,]           47.3          15.3               222        5250
## [177,]           42.8          14.2               209        4700
## [178,]           45.1          14.5               207        5050
## [179,]           59.6          17.0               230        6050
## [180,]           49.1          14.8               220        5150
## [181,]           48.4          16.3               220        5400
## [182,]           42.6          13.7               213        4950
## [183,]           44.4          17.3               219        5250
## [184,]           44.0          13.6               208        4350
## [185,]           48.7          15.7               208        5350
## [186,]           42.7          13.7               208        3950
## [187,]           49.6          16.0               225        5700
## [188,]           45.3          13.7               210        4300
## [189,]           49.6          15.0               216        4750
## [190,]           50.5          15.9               222        5550
## [191,]           43.6          13.9               217        4900
## [192,]           45.5          13.9               210        4200
## [193,]           50.5          15.9               225        5400
## [194,]           44.9          13.3               213        5100
## [195,]           45.2          15.8               215        5300
## [196,]           46.6          14.2               210        4850
## [197,]           48.5          14.1               220        5300
## [198,]           45.1          14.4               210        4400
## [199,]           50.1          15.0               225        5000
## [200,]           46.5          14.4               217        4900
## [201,]           45.0          15.4               220        5050
## [202,]           43.8          13.9               208        4300
## [203,]           45.5          15.0               220        5000
## [204,]           43.2          14.5               208        4450
## [205,]           50.4          15.3               224        5550
## [206,]           45.3          13.8               208        4200
## [207,]           46.2          14.9               221        5300
## [208,]           45.7          13.9               214        4400
## [209,]           54.3          15.7               231        5650
## [210,]           45.8          14.2               219        4700
## [211,]           49.8          16.8               230        5700
## [212,]           49.5          16.2               229        5800
## [213,]           43.5          14.2               220        4700
## [214,]           50.7          15.0               223        5550
## [215,]           47.7          15.0               216        4750
## [216,]           46.4          15.6               221        5000
## [217,]           48.2          15.6               221        5100
## [218,]           46.5          14.8               217        5200
## [219,]           46.4          15.0               216        4700
## [220,]           48.6          16.0               230        5800
## [221,]           47.5          14.2               209        4600
## [222,]           51.1          16.3               220        6000
## [223,]           45.2          13.8               215        4750
## [224,]           45.2          16.4               223        5950
## [225,]           49.1          14.5               212        4625
## [226,]           52.5          15.6               221        5450
## [227,]           47.4          14.6               212        4725
## [228,]           50.0          15.9               224        5350
## [229,]           44.9          13.8               212        4750
## [230,]           50.8          17.3               228        5600
## [231,]           43.4          14.4               218        4600
## [232,]           51.3          14.2               218        5300
## [233,]           47.5          14.0               212        4875
## [234,]           52.1          17.0               230        5550
## [235,]           47.5          15.0               218        4950
## [236,]           52.2          17.1               228        5400
## [237,]           45.5          14.5               212        4750
## [238,]           49.5          16.1               224        5650
## [239,]           44.5          14.7               214        4850
## [240,]           50.8          15.7               226        5200
## [241,]           49.4          15.8               216        4925
## [242,]           46.9          14.6               222        4875
## [243,]           48.4          14.4               203        4625
## [244,]           51.1          16.5               225        5250
## [245,]           48.5          15.0               219        4850
## [246,]           55.9          17.0               228        5600
## [247,]           47.2          15.5               215        4975
## [248,]           49.1          15.0               228        5500
## [249,]           46.8          16.1               215        5500
## [250,]           41.7          14.7               210        4700
## [251,]           53.4          15.8               219        5500
## [252,]           43.3          14.0               208        4575
## [253,]           48.1          15.1               209        5500
## [254,]           50.5          15.2               216        5000
## [255,]           49.8          15.9               229        5950
## [256,]           43.5          15.2               213        4650
## [257,]           51.5          16.3               230        5500
## [258,]           46.2          14.1               217        4375
## [259,]           55.1          16.0               230        5850
## [260,]           48.8          16.2               222        6000
## [261,]           47.2          13.7               214        4925
## [262,]           46.8          14.3               215        4850
## [263,]           50.4          15.7               222        5750
## [264,]           45.2          14.8               212        5200
## [265,]           49.9          16.1               213        5400
## [266,]           46.5          17.9               192        3500
## [267,]           50.0          19.5               196        3900
## [268,]           51.3          19.2               193        3650
## [269,]           45.4          18.7               188        3525
## [270,]           52.7          19.8               197        3725
## [271,]           45.2          17.8               198        3950
## [272,]           46.1          18.2               178        3250
## [273,]           51.3          18.2               197        3750
## [274,]           46.0          18.9               195        4150
## [275,]           51.3          19.9               198        3700
## [276,]           46.6          17.8               193        3800
## [277,]           51.7          20.3               194        3775
## [278,]           47.0          17.3               185        3700
## [279,]           52.0          18.1               201        4050
## [280,]           45.9          17.1               190        3575
## [281,]           50.5          19.6               201        4050
## [282,]           50.3          20.0               197        3300
## [283,]           58.0          17.8               181        3700
## [284,]           46.4          18.6               190        3450
## [285,]           49.2          18.2               195        4400
## [286,]           42.4          17.3               181        3600
## [287,]           48.5          17.5               191        3400
## [288,]           43.2          16.6               187        2900
## [289,]           50.6          19.4               193        3800
## [290,]           46.7          17.9               195        3300
## [291,]           52.0          19.0               197        4150
## [292,]           50.5          18.4               200        3400
## [293,]           49.5          19.0               200        3800
## [294,]           46.4          17.8               191        3700
## [295,]           52.8          20.0               205        4550
## [296,]           40.9          16.6               187        3200
## [297,]           54.2          20.8               201        4300
## [298,]           42.5          16.7               187        3350
## [299,]           51.0          18.8               203        4100
## [300,]           49.7          18.6               195        3600
## [301,]           47.5          16.8               199        3900
## [302,]           47.6          18.3               195        3850
## [303,]           52.0          20.7               210        4800
## [304,]           46.9          16.6               192        2700
## [305,]           53.5          19.9               205        4500
## [306,]           49.0          19.5               210        3950
## [307,]           46.2          17.5               187        3650
## [308,]           50.9          19.1               196        3550
## [309,]           45.5          17.0               196        3500
## [310,]           50.9          17.9               196        3675
## [311,]           50.8          18.5               201        4450
## [312,]           50.1          17.9               190        3400
## [313,]           49.0          19.6               212        4300
## [314,]           51.5          18.7               187        3250
## [315,]           49.8          17.3               198        3675
## [316,]           48.1          16.4               199        3325
## [317,]           51.4          19.0               201        3950
## [318,]           45.7          17.3               193        3600
## [319,]           50.7          19.7               203        4050
## [320,]           42.5          17.3               187        3350
## [321,]           52.2          18.8               197        3450
## [322,]           45.2          16.6               191        3250
## [323,]           49.3          19.9               203        4050
## [324,]           50.2          18.8               202        3800
## [325,]           45.6          19.4               194        3525
## [326,]           51.9          19.5               206        3950
## [327,]           46.8          16.5               189        3650
## [328,]           45.7          17.0               195        3650
## [329,]           55.8          19.8               207        4000
## [330,]           43.5          18.1               202        3400
## [331,]           49.6          18.2               193        3775
## [332,]           50.8          19.0               210        4100
## [333,]           50.2          18.7               198        3775
penguin_pca <- princomp(penguin_matrix, cor=TRUE)
summary(penguin_pca)
## Importance of components:
##                           Comp.1    Comp.2     Comp.3     Comp.4
## Standard deviation     1.6569115 0.8821095 0.60715939 0.32845789
## Proportion of Variance 0.6863389 0.1945293 0.09216063 0.02697115
## Cumulative Proportion  0.6863389 0.8808682 0.97302885 1.00000000
loadings(penguin_pca)
## 
## Loadings:
##                   Comp.1 Comp.2 Comp.3 Comp.4
## bill_length_mm     0.454  0.600  0.642  0.145
## bill_depth_mm     -0.399  0.796 -0.426 -0.160
## flipper_length_mm  0.577        -0.236 -0.782
## body_mass_g        0.550        -0.592  0.585
## 
##                Comp.1 Comp.2 Comp.3 Comp.4
## SS loadings      1.00   1.00   1.00   1.00
## Proportion Var   0.25   0.25   0.25   0.25
## Cumulative Var   0.25   0.50   0.75   1.00
biplot(penguin_pca)

penguin_pca <- princomp(penguin_matrix, cor=TRUE)
summary(penguin_pca)
## Importance of components:
##                           Comp.1    Comp.2     Comp.3     Comp.4
## Standard deviation     1.6569115 0.8821095 0.60715939 0.32845789
## Proportion of Variance 0.6863389 0.1945293 0.09216063 0.02697115
## Cumulative Proportion  0.6863389 0.8808682 0.97302885 1.00000000

Statistics

Additional Ways of Importing/Reading Data

rand <- c(12, 54, 98, 65, 38)
rand
## [1] 12 54 98 65 38
sum(rand)
## [1] 267
length(rand)
## [1] 5
avg.rand <- sum(rand)/length(rand)
avg.rand
## [1] 53.4
cumsum(rand)
## [1]  12  66 164 229 267
pedes <- scan()
pedes
## numeric(0)

Analyses

Univariate Statistics

  1. Categorical Data
  1. Barplots
beer <- c(3, 4, 1, 1, 3, 4, 3, 3, 1, 3, 2, 1, 2, 1, 2, 3, 2, 3, 1, 1, 1, 1, 4, 3, 1)
barplot(beer)

table(beer)
## beer
##  1  2  3  4 
## 10  4  8  3
barplot(table(beer), xlab="Beer", ylab="Frequency")

barplot(table(beer)/length(beer), xlab="Beer", ylab="Proportion")

b. Pie Charts

pie(table(beer), main="Beer Preference by Students")

2. Numerical Data a. Stem and Leaf Plots

#stem(pedes)
  1. Strip Chart
#stripchart(pedes, method="stack")
  1. Measures of Center
  1. Mean
#mean(pedes)
mean(gapminder$lifeExp)
## [1] 59.47444
  1. MEedian
median(pedes)
## [1] NA
median(gapminder$lifeExp)
## [1] 60.7125
  1. Mode
which(table(pedes) == max(table(pedes)))
## Warning in max(table(pedes)): no non-missing arguments to max; returning -Inf
## integer(0)
  1. Variation
  1. range
range(pedes)
## Warning in min(x): no non-missing arguments to min; returning Inf
## Warning in max(x): no non-missing arguments to max; returning -Inf
## [1]  Inf -Inf
  1. Variance
var(pedes)
## [1] NA
  1. Standard Deviation
sd(pedes)
## [1] NA
  1. Inter Quartile Range
IQR(pedes)
## [1] NA
  1. z-score
scale(pedes)
##      [,1]
## attr(,"scaled:center")
## [1] NaN
## attr(,"scaled:scale")
## [1] 0
  1. Summary
summary(pedes)
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
## 
  1. Plotting
  1. histograms
#hist(pedes, breaks = "scott")
#hist(pedes, breaks = "scott", prob=TRUE)
#hist(pedes, breaks="scott", prob=TRUE)
#lines(density(pedes))
#plot(density(pedes))
  1. Boxplots
#boxplot(pedes)
#summary(boxplot(pedes))

Bivariate and Multivariate Stats

  1. Plotting and Regression
  1. Boxplotting
spid.gen <- read.csv("~/Desktop/Practical Computing /biol48806220_Fall2022/Data/spider_genitalia.csv", header = T)
spid.gen
boxplot(spid.gen$left.bulb/spid.gen$carapace.length ~ spid.gen$habitat)

  1. scatter plotting
plot(spid.gen$left.bulb/spid.gen$right.bulb)

plot(spid.gen$left.bulb/spid.gen$right.bulb, pch = as.character(spid.gen$habitat))

  1. Linear Regression
gen.reg <- lm(spid.gen$left.bulb~spid.gen$right.bulb)
gen.reg
## 
## Call:
## lm(formula = spid.gen$left.bulb ~ spid.gen$right.bulb)
## 
## Coefficients:
##         (Intercept)  spid.gen$right.bulb  
##             47.2805               0.7545
summary(gen.reg)
## 
## Call:
## lm(formula = spid.gen$left.bulb ~ spid.gen$right.bulb)
## 
## Residuals:
##     Min      1Q  Median      3Q     Max 
## -28.973 -16.272  -7.931  12.167  48.620 
## 
## Coefficients:
##                     Estimate Std. Error t value Pr(>|t|)   
## (Intercept)          47.2805    27.0506   1.748  0.10600   
## spid.gen$right.bulb   0.7545     0.1974   3.823  0.00243 **
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## Residual standard error: 24.67 on 12 degrees of freedom
## Multiple R-squared:  0.5491, Adjusted R-squared:  0.5115 
## F-statistic: 14.61 on 1 and 12 DF,  p-value: 0.002427
plot(spid.gen$left.bulb ~ spid.gen$right.bulb)
abline(gen.reg)

  1. Correlation Coefficients & Spearman Rank Correlation
cor.gen <- with(spid.gen, cor(left.bulb, right.bulb))
cor.gen^2
## [1] 0.5491086
spearman.cor.gen <- with(spid.gen, cor(left.bulb, right.bulb, method="spearman"))
spearman.cor.gen
## [1] 0.7262764
  1. Residuals
residuals(gen.reg)
##          1          2          3          4          5          6          7 
##   9.026729 -17.942400  21.026729 -10.116375 -21.410662 -28.973271  -5.901718 
##          8          9         10         11         12         13         14 
##  48.620209 -11.259480  -2.241592  40.566544  13.213688 -24.648113  -9.960288
  1. Transformations
#plot(log10(spid.gen$left.bulb^2)~spid.gen$right.bulb)
#log.left.bulb <- log10()
  1. Comparing Discrete Treatment Effects a. Chi-Square Test
obs_weighted <- c(4,15,6,15,18,2)
obs_fair <- c(10,10,10,10,10,10)
exp <- c(.16,.17,.16,.17,.17,.17)
chisq.test(obs_weighted, p=exp)
## 
##  Chi-squared test for given probabilities
## 
## data:  obs_weighted
## X-squared = 21.691, df = 5, p-value = 0.0005993
chisq.test(obs_fair, p=exp)
## 
##  Chi-squared test for given probabilities
## 
## data:  obs_fair
## X-squared = 0.04902, df = 5, p-value = 1
  1. T-tests
#H0 - true mean is equal to 0, but you can set true mean to other values with mu=
t.test(spid.gen$carapace.length)
## 
##  One Sample t-test
## 
## data:  spid.gen$carapace.length
## t = 27.953, df = 13, p-value = 5.373e-13
## alternative hypothesis: true mean is not equal to 0
## 95 percent confidence interval:
##  26.69279 31.16436
## sample estimates:
## mean of x 
##  28.92857
mean(spid.gen$carapace.length)
## [1] 28.92857
t.test(spid.gen$carapace.length, mu=29)
## 
##  One Sample t-test
## 
## data:  spid.gen$carapace.length
## t = -0.069019, df = 13, p-value = 0.946
## alternative hypothesis: true mean is not equal to 29
## 95 percent confidence interval:
##  26.69279 31.16436
## sample estimates:
## mean of x 
##  28.92857
habitat.t2 <- t.test(spid.gen$left.bulb~spid.gen$habitat)
habitat.t2
## 
##  Welch Two Sample t-test
## 
## data:  spid.gen$left.bulb by spid.gen$habitat
## t = -4.9442, df = 11.485, p-value = 0.0003868
## alternative hypothesis: true difference in means between group A and group B is not equal to 0
## 95 percent confidence interval:
##  -80.38903 -31.03954
## sample estimates:
## mean in group A mean in group B 
##        119.7143        175.4286
habitat.tless <- t.test(spid.gen$left.bulb, alternative = "less")
habitat.tless
## 
##  One Sample t-test
## 
## data:  spid.gen$left.bulb
## t = 15.643, df = 13, p-value = 1
## alternative hypothesis: true mean is less than 0
## 95 percent confidence interval:
##      -Inf 164.2781
## sample estimates:
## mean of x 
##  147.5714
habitat.tmore <- t.test(spid.gen$left.bulb, alternative = "greater")
habitat.tmore
## 
##  One Sample t-test
## 
## data:  spid.gen$left.bulb
## t = 15.643, df = 13, p-value = 4.109e-10
## alternative hypothesis: true mean is greater than 0
## 95 percent confidence interval:
##  130.8648      Inf
## sample estimates:
## mean of x 
##  147.5714
  1. Analysis of Variance (ANOVA)
gen.lm <- lm(spid.gen$left.bulb~spid.gen$habitat)
summary(gen.lm)
## 
## Call:
## lm(formula = spid.gen$left.bulb ~ spid.gen$habitat)
## 
## Residuals:
##     Min      1Q  Median      3Q     Max 
## -29.714 -16.250   2.429  20.036  23.286 
## 
## Coefficients:
##                   Estimate Std. Error t value Pr(>|t|)    
## (Intercept)        119.714      7.968  15.024 3.82e-09 ***
## spid.gen$habitatB   55.714     11.269   4.944  0.00034 ***
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## Residual standard error: 21.08 on 12 degrees of freedom
## Multiple R-squared:  0.6707, Adjusted R-squared:  0.6433 
## F-statistic: 24.45 on 1 and 12 DF,  p-value: 0.0003397
anova(gen.lm)
gen.anova <- aov(spid.gen$left.bulb~spid.gen$habitat)
summary(gen.anova)
##                  Df Sum Sq Mean Sq F value  Pr(>F)    
## spid.gen$habitat  1  10864   10864   24.45 0.00034 ***
## Residuals        12   5333     444                    
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
gapminder.lifeexp.continent.anova <- aov(gapminder2$lifeExp~gapminder2$continent)
summary(gapminder.lifeexp.continent.anova)
##                        Df Sum Sq Mean Sq F value Pr(>F)    
## gapminder2$continent    4 139343   34836   408.7 <2e-16 ***
## Residuals            1699 144805      85                   
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
gapminder.tukey.two.way <- TukeyHSD(gapminder.lifeexp.continent.anova)
gapminder.tukey.two.way
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = gapminder2$lifeExp ~ gapminder2$continent)
## 
## $`gapminder2$continent`
##                       diff       lwr       upr     p adj
## Americas-Africa  15.793407 14.022263 17.564550 0.0000000
## Asia-Africa      11.199573  9.579887 12.819259 0.0000000
## Europe-Africa    23.038356 21.369862 24.706850 0.0000000
## Oceania-Africa   25.460878 20.216908 30.704848 0.0000000
## Asia-Americas    -4.593833 -6.523432 -2.664235 0.0000000
## Europe-Americas   7.244949  5.274203  9.215696 0.0000000
## Oceania-Americas  9.667472  4.319650 15.015293 0.0000086
## Europe-Asia      11.838783 10.002952 13.674614 0.0000000
## Oceania-Asia     14.261305  8.961718 19.560892 0.0000000
## Oceania-Europe    2.422522 -2.892185  7.737230 0.7250559
  1. Analysis of Co-Variance (ANCOVA)
boxplot(spid.gen$left.bulb~spid.gen$habitat)

gen.ancova <- lm(spid.gen$left.bulb~spid.gen$habitat*spid.gen$carapace.length)
summary(gen.ancova)
## 
## Call:
## lm(formula = spid.gen$left.bulb ~ spid.gen$habitat * spid.gen$carapace.length)
## 
## Residuals:
##      Min       1Q   Median       3Q      Max 
## -30.6283 -15.3730  -0.5873  20.4238  23.5985 
## 
## Coefficients:
##                                            Estimate Std. Error t value Pr(>|t|)
## (Intercept)                                83.77695   74.20197   1.129    0.285
## spid.gen$habitatB                          54.04992   95.66731   0.565    0.585
## spid.gen$carapace.length                    1.24535    2.55457   0.488    0.636
## spid.gen$habitatB:spid.gen$carapace.length  0.05126    3.28273   0.016    0.988
## 
## Residual standard error: 22.4 on 10 degrees of freedom
## Multiple R-squared:  0.6903, Adjusted R-squared:  0.5975 
## F-statistic: 7.431 on 3 and 10 DF,  p-value: 0.006635
gapminder.lifeexp.continent_GDP.ancova<-lm(gapminder2$lifeExp~gapminder2$continent*gapminder2$gdpPercap)
summary(gapminder.lifeexp.continent_GDP.ancova)
## 
## Call:
## lm(formula = gapminder2$lifeExp ~ gapminder2$continent * gapminder2$gdpPercap)
## 
## Residuals:
##     Min      1Q  Median      3Q     Max 
## -36.928  -4.312   0.308   5.042  21.202 
## 
## Coefficients:
##                                                     Estimate Std. Error t value
## (Intercept)                                       45.8442668  0.4127085 111.081
## gapminder2$continentAmericas                      12.9933944  0.8169417  15.905
## gapminder2$continentAsia                          11.6704021  0.6252438  18.665
## gapminder2$continentEurope                        19.4982172  0.8924238  21.849
## gapminder2$continentOceania                       17.8506916  5.2591340   3.394
## gapminder2$gdpPercap                               0.0013771  0.0001154  11.937
## gapminder2$continentAmericas:gapminder2$gdpPercap -0.0005614  0.0001369  -4.102
## gapminder2$continentAsia:gapminder2$gdpPercap     -0.0010544  0.0001190  -8.860
## gapminder2$continentEurope:gapminder2$gdpPercap   -0.0009237  0.0001242  -7.438
## gapminder2$continentOceania:gapminder2$gdpPercap  -0.0008062  0.0002909  -2.772
##                                                   Pr(>|t|)    
## (Intercept)                                        < 2e-16 ***
## gapminder2$continentAmericas                       < 2e-16 ***
## gapminder2$continentAsia                           < 2e-16 ***
## gapminder2$continentEurope                         < 2e-16 ***
## gapminder2$continentOceania                       0.000704 ***
## gapminder2$gdpPercap                               < 2e-16 ***
## gapminder2$continentAmericas:gapminder2$gdpPercap 4.29e-05 ***
## gapminder2$continentAsia:gapminder2$gdpPercap      < 2e-16 ***
## gapminder2$continentEurope:gapminder2$gdpPercap   1.61e-13 ***
## gapminder2$continentOceania:gapminder2$gdpPercap  0.005639 ** 
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## Residual standard error: 8.143 on 1694 degrees of freedom
## Multiple R-squared:  0.6047, Adjusted R-squared:  0.6026 
## F-statistic: 287.9 on 9 and 1694 DF,  p-value: < 2.2e-16
#install.packages("multcomp", dependencies = T)
library(multcomp)
## Loading required package: mvtnorm
## Loading required package: survival
## Loading required package: TH.data
## Loading required package: MASS
## 
## Attaching package: 'MASS'
## The following object is masked _by_ '.GlobalEnv':
## 
##     cats
## The following object is masked from 'package:sm':
## 
##     muscle
## The following object is masked from 'package:dplyr':
## 
##     select
## 
## Attaching package: 'TH.data'
## The following object is masked from 'package:MASS':
## 
##     geyser
## The following object is masked from 'package:sm':
## 
##     geyser
#posthoc.gapminder.ancova <- glht(gapminder.lifeexp.continent_GDP.ancova, linfct = mcp(technique = "Tukey"))
  1. Principle Component Analysis
sp.matrix <- with(spid.gen, cbind(left.bulb, right.bulb, carapace.length, leg4.length))
sp.matrix
##       left.bulb right.bulb carapace.length leg4.length
##  [1,]       131         99              34          12
##  [2,]       141        148              27          13
##  [3,]       143         99              31          11
##  [4,]       136        131              26          14
##  [5,]        90         85              24          14
##  [6,]        93         99              32          12
##  [7,]       104         83              28          12
##  [8,]       197        134              29           9
##  [9,]       159        163              21           8
## [10,]       165        159              33           9
## [11,]       198        146              29           9
## [12,]       188        169              31          10
## [13,]       169        194              34          11
## [14,]       152        152              26          10
sp.pca<-princomp(sp.matrix, cor=TRUE)
summary(sp.pca)
## Importance of components:
##                           Comp.1    Comp.2    Comp.3     Comp.4
## Standard deviation     1.5371406 0.9952591 0.6818601 0.42629209
## Proportion of Variance 0.5907003 0.2476352 0.1162333 0.04543124
## Cumulative Proportion  0.5907003 0.8383355 0.9545688 1.00000000
loadings(sp.pca)
## 
## Loadings:
##                 Comp.1 Comp.2 Comp.3 Comp.4
## left.bulb        0.612                0.790
## right.bulb       0.555         0.707 -0.431
## carapace.length  0.112  0.989              
## leg4.length     -0.552  0.125  0.707  0.425
## 
##                Comp.1 Comp.2 Comp.3 Comp.4
## SS loadings      1.00   1.00   1.00   1.00
## Proportion Var   0.25   0.25   0.25   0.25
## Cumulative Var   0.25   0.50   0.75   1.00
biplot(sp.pca)

sp.pca$score
##           Comp.1      Comp.2      Comp.3      Comp.4
##  [1,] -1.0071139  1.49278036 -0.37671432  0.15188247
##  [2,] -0.5221843 -0.41548281  1.09703570  0.16080552
##  [3,] -0.5833246  0.63307513 -0.73422596  0.27843866
##  [4,] -1.2226258 -0.57142458  1.12670047  0.51889106
##  [5,] -2.8749756 -0.99525900  0.16627931  0.09479508
##  [6,] -1.7515969  0.95507540 -0.36354352 -0.67988018
##  [7,] -1.9396160 -0.06226006 -0.66997532 -0.11518793
##  [8,]  1.5060518 -0.10827976 -0.73821824  0.67446820
##  [9,]  1.3604866 -2.37581671 -0.44640551 -0.60685659
## [10,]  1.4653625  0.88213527 -0.24277571 -0.49436855
## [11,]  1.7233137 -0.13820869 -0.48430877  0.54286105
## [12,]  1.6873375  0.39920551  0.36769521  0.19164609
## [13,]  1.5526124  1.19469045  1.25359134 -0.42017544
## [14,]  0.6062728 -0.89023052  0.04486533 -0.29731944
#install.packages("ggfortify", dependencies = T)
library(ggfortify)
sp.pca.plot <- autoplot(sp.pca, 
                        data = spid.gen, 
                        colour = 'habitat')
sp.pca.plot

plot(1:25, rep(0.25,25), pch=1:25, col=1:25, ylim=c(0,6), cex=2, ylab="Line types (lty) 1 to 6", xlab="Plotting character (pch) 1 to 25 and colours (col) 1 to 8", main="Line types (lty), plotting characters (pch),\nand colors (col) for plot and xyplot", lab=c(25,7,2))

points(1:8, rep(0.5,8), pch=20, col=1:8, cex=4)

abline(h=1:6, lty=1:6, lwd=5)

pdf("~/Desktop/Practical Computing /biol48806220_Fall2022/results/PlotCheatSheet.pdf")

plot(1:25, rep(0.25,25), pch=1:25, col=1:25, ylim=c(0,6), cex=2, ylab="Line types (lty) 1 to 6", xlab="Plotting character (pch) 1 to 25 and colours (col) 1 to 8", main="Line types (lty), plotting characters (pch),\nand colors (col) for plot and xyplot", lab=c(25,7,2))

points(1:8, rep(0.5,8), pch=20, col=1:8, cex=4)

abline(h=1:6, lty=1:6, lwd=5)

Looping and Conditionals

  1. If/Then Statements
x <- 0 
if(x>0){
  print("Positive Number")
} else if (x<0){
  print("Negative Number")
} else 
  print("Zero")
## [1] "Zero"
a <- c(5,7,2,9)
ifelse(a %% 2 == 0, "even", "odd")
## [1] "odd"  "odd"  "even" "odd"
  1. For loops
z <- c(2,5,3,9,8,11,6)
count <- 0 

for (val in z){
  if(val %% 2 == 0) count = count+1
}
print(count)
## [1] 3
  1. While Statement
i <- 1
while(i<5){
  print(i)
  i=i+1
}
## [1] 1
## [1] 2
## [1] 3
## [1] 4
  1. Interruptions
x <- 1:5

for (val in x){
  print(val)
  if (val == 3 ){
    #print(val)
    break
  }
  #print(val)
}
## [1] 1
## [1] 2
## [1] 3
x <- 1:5

for (val in x){
  if (val==3){
    next
  }
  print(val)
}
## [1] 1
## [1] 2
## [1] 4
## [1] 5
x<-1
repeat{
  print(x)
  x=x+1
  if(x==20){
    break
  }
}
## [1] 1
## [1] 2
## [1] 3
## [1] 4
## [1] 5
## [1] 6
## [1] 7
## [1] 8
## [1] 9
## [1] 10
## [1] 11
## [1] 12
## [1] 13
## [1] 14
## [1] 15
## [1] 16
## [1] 17
## [1] 18
## [1] 19

Randomization and Dataset Management (short)

  1. Dataset Management
B <- matrix(
  c(2,4,3,1,5,87), 
  nrow=3, 
  ncol=2
)
B
##      [,1] [,2]
## [1,]    2    1
## [2,]    4    5
## [3,]    3   87
t(B)
##      [,1] [,2] [,3]
## [1,]    2    4    3
## [2,]    1    5   87
C <- matrix(
  c(7,4,2),
  nrow=3, 
  ncol=1
)
C
##      [,1]
## [1,]    7
## [2,]    4
## [3,]    2
BC<-cbind(B,C)
BC
##      [,1] [,2] [,3]
## [1,]    2    1    7
## [2,]    4    5    4
## [3,]    3   87    2
c(B)
## [1]  2  4  3  1  5 87
  1. Randomizations

rnorm(n,mean,sd) sample(x, size, replace=FALSE, prob=NULL)

ndist <- rnorm(100, 50, 10)
ndist
##   [1] 69.56279 54.93068 48.54788 42.42145 49.94617 58.95224 54.20029 62.87287
##   [9] 57.03860 38.85259 46.07683 49.08655 67.08520 44.86673 45.91349 53.18390
##  [17] 42.61842 43.09572 47.44281 44.20864 52.21638 68.81437 51.97345 47.28323
##  [25] 35.67109 47.60073 48.50749 50.20201 65.22971 50.35935 72.28211 43.62162
##  [33] 35.38951 44.41700 44.20100 55.29586 48.31205 60.74882 68.36697 62.75929
##  [41] 48.31535 54.69394 29.57107 60.18149 39.16682 69.03828 70.82670 41.55247
##  [49] 41.91911 39.68506 51.73555 41.27658 59.78346 70.14342 42.83115 62.64578
##  [57] 48.40008 42.01418 53.27484 46.48994 62.15559 42.10451 42.22559 56.50702
##  [65] 49.42932 45.61287 57.84909 67.64515 46.06932 50.50257 51.57365 52.89253
##  [73] 63.87321 35.71464 52.76219 55.89911 36.48282 41.65027 65.29194 54.71753
##  [81] 34.79573 48.01983 33.78735 48.38507 57.58758 45.54451 49.89631 54.98353
##  [89] 69.41667 39.90284 48.68782 61.88544 45.11089 60.36944 44.72995 41.81302
##  [97] 48.42153 50.55223 38.34315 47.25634
mean(ndist)
## [1] 50.88149
sd(ndist)
## [1] 9.779249
hist(ndist)

sample(ndist, 10)
##  [1] 44.20864 42.22559 49.89631 52.21638 42.83115 68.81437 50.20201 41.55247
##  [9] 59.78346 48.01983
test <-1:100
test
##   [1]   1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18
##  [19]  19  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36
##  [37]  37  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54
##  [55]  55  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72
##  [73]  73  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90
##  [91]  91  92  93  94  95  96  97  98  99 100
sort(sample(test, 50, replace=FALSE))
##  [1]   1   5   6  10  11  12  15  18  19  20  22  24  28  29  30  35  36  37  39
## [20]  40  42  46  47  48  49  50  54  56  57  58  59  60  61  64  67  68  69  70
## [39]  71  74  79  82  87  91  93  94  97  98  99 100
sort(sample(test, 50, replace=TRUE))
##  [1]  2  8  8 12 18 21 22 23 23 28 29 30 30 31 36 37 38 41 42 43 44 44 44 47 47
## [26] 49 50 51 54 56 58 59 61 62 63 66 70 73 74 75 76 79 81 81 81 82 85 89 91 96